| Annotation |
|---|
| Description | jgi|Araly1|483061|fgenesh2_kg.4__2121__AT2G40150.1 |
| Sequence |
TCTCTCCGAC CCACATGCCG ACACTTTACA TAACTGTTGA CCAAGTTCCT CTTCTTTCTT CTTTATCAGA TCATGCAACC TTCAAGAACA AGAGTTCCAT TTTTCGAAAC AGGAGTGATC ATGAAGCAGA GAAAGAAGAG TAATCTCTCA ATCTCCGTAA TCGTCTTCTC TCTTTTCCTC TTGGGGATCT TCATGTACAA TGACAACCTC AAATCCTCCA TCGTTGACTT CACATATTCG AACCCATTCT CTAGTTCATT TGTGGAGTTG CCACCGGAGG AGTGTGATCT CTTCACCGGT GAATGGGTTT TCGACAACAA GACACATCCA TTGTATAAAG AGGAAGAGTG TGAGTTCTTG ACGGAGCAAG TGACTTGCTT AAGAAACGGA AGGAAAGATT CTTTGTTTCA GAATTGGAGA TGGCAACCTA GAGACTGTTC TTTACCAAAA TGAAGCAGAG AAAGAAGAGT AATCTCTCAA TCTTCGTAAT CGTCTTCTCT CTTTTCCTCT TGGGGATCTT CATGTACAAT GACAACCTCA AATCCTCCAT TGCTGATTTC ACATCTTCGA ACCCATTCTC TAGTTCATCT GTGGAGTTGC CGCCGGAGGA GTGTGATCTC TTCACCGGTC AATGGGTTTT CGACAACAAG ACATATCCAT TGTATAAAGA AGAAGAGTGT GAGTTCTTGA CGGAGCAAGT GACTTGCTTA AGAAACGGAA GGAAAGATTC TCTGTTTCAG AATTGGAGAT GGCAACCTAG AGACTGTTCT TTACCAAAAT TCAAAGCGAG GGTGTTGCTA GAGAAGCTGA GGAACAAGAG ATTGATGTTT GTTGGTGACT CGTTAAACCG GAACCAATGG GAATCAATGG TTTGTTTGGT TCAATCAGCG ATTCCTCCCG GTAGAAAGAG CTTAAACCAG ACCGGTTCTC TCACTGTTTT CAAAATTCAG GACTATAACG CGACGGTGGA GTTTTATTGG GCGCCATTTT TGGTAGAATC AAATTCAGAC GATCCGAGAA AGCACAGTAT AATCGACCGT ATAATAATGC CAGAGTCTAT CGAGAAACAT GGAGTCAACT GGATAGGTGT TGACTTTCTT GTCTTCAATA GTTACATCTG GTGGATGAAC ACTGTCTCCA TCAAAGTTCT ACGTGGATCG TTCGATGATG GGGACACAGA GTATGATGAG ATCAAACGGC CAATGGCGTA CGAGAGGATG TTGAGGACAT TGGGAGATTG GGTGAACCAT AACATTGATC CTCTAAGTAC AACTGTTTTC TTCATGAGCA TGTCTCCTCT TCACATCAAG AGCTTAGATT GGGATAATCC AGAGGGTATA ATGTGTGCTT TAGAGACAAC ACCAATCTTA AACATGTCTT TCAACGTGGG GACGAACTAT AGGCTGTTTT CCGCGGTGGG AACGGACTAT AGGCTGTTTT CGGTGGTGGA AAACGTTACG CAGTCTCTCA AAGTTCCTAT TCATTTCCTC AACATCACTG CATTGTCTGA GTATCGTAAA GATGCACATA CTTCAGTTTA CACGATCAAG CAAGGCAAAT TGCTGACTCG GGAGCAACAA GCTGATCCGG CCAATTTTGC TGATTGCATA CACTGGTGCT TACCAGGCCT TCCTGATACT TGGAATGAGT TTCTCTATAC ACATATTATT TCTCAAAGAT GAAATTATTT GGATTCTTTC CTCCCTTTTT TTTGGTTTTA AAAAAATTCT TGTGATGTAT ATAGGACGAA GATTTAAGGG ATTTAAAGT |
| Length | 1769 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 18569269.. 18573742 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G40150.1 |
| Description | TRICHOME BIREFRINGENCE-LIKE 28 |
| TAIR curator summary | Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). |
| Alias | [TBL28][TRICHOME BIREFRINGENCE-LIKE 28] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.4641 |
Ahg937893 | NAD(P)-binding Rossmann-fold superfamily protein |
| 22.4054 |
Ahg923049 | inositol polyphosphate 5-phosphatase 11 |
| 28.8097 |
Ahg925155 | lipases;hydrolases, acting on ester bonds |
| 36.8782 |
Ahg481623 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
| 41.4246 |
Ahg478582 | serine carboxypeptidase-like 16 |
| 49.4975 |
Ahg483864 | |
| 49.5984 |
Ahg488595 | Homeodomain-like superfamily protein |
| 72.7461 |
Ahg939260 | cytochrome p450 78a9 |
| 74.4715 |
Ahg919629 | myb domain protein 60 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|