Detail



ID : Ahg478627

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478627|fgenesh2_kg.3__1328__AT3G12680.1
Sequence
GTAAACCCCA CAAACACAAC AATTTGATAA TTTGACACCA AAAAGTAGAA AGCTTTCCTT TAGGGTTTCT CTTTTCAATC GAATGGCACA TCGTCAATTG TATAGCTACG CTCTTCAACC TTCTTACGCT GCTGCCTCCG CCGTATCTCC AGCTCCTCCG CCGCAACAGC AGCCGCCAAA AACCGGTCTT TCCTCTCTCT ACGGTTCTTC TGCTGATCAT TATTACCCCG ATACCACGTT TCGTTTCTTA GCTCGCGATG GATCCGAAGC TTTGAGCAAC TATTCAGGGA CTCTTGCATC GTCTTCCGCT ATGTACCACC ATTTGCCTAA CACGACGGCA TCGCATTTGG CGTATCCGCA GCTGCTTCAA CATCAGGAAG CAGCTTGGCC ACCTGGTGTG GAGGTTCCAG GTGCTTCTTC CGCCGTCGAG CCACTTCCGC CTGGTGTCAA ACGCACCTCT GAAGCGCTCT ACTATCCGAC TCTGTTGGGT GCCCATAATA CAATTGGTCA AACCGAAGCT TGGTATACTA CAGACTATTT TACCAAGCGC CCTAAGTTGG AGAGTACAAG CCATTTGCCT ATATATCCAC AGAGGGCAGG AGAGAAGGAT TGTACCCACT ATATGCAAAC AAGAACATGT AAATTTGGAG ATAGCTGCAA GTTTGATCAT CCTATTTGGG TTCCTGAGGG CGGAATCCCA GATTGGAAAG AGGCACCAGT TGTTCCAAAT GAAGAGTACC CTGAGAGACC AGGAGAACCA GATTGTCCTT ACTATATAAA AACCCAACGC TGCAAATATG GTTCAAGGTG CAAATTTAAT CATCCGAGAG AAGAGGCTGC AGTTAGTGTT GAAACCCAAG ATGCATTGCC TGAGAGGCCT TCTGAACCTA TGTGCACATT CTACATGAAG ACTGGAAAAT GTAAATTTGG TTTAACATGC AAATTCCACC ATCCAAAGGA TATCCAGGTA CCATCATCTA GTCAGGATAA TGGTAGCAGT GTGGGGTTAA CCAGTGAGCC TGATGCCACA AACAATCCGC ATGTCACATT TACCCCAGCA TTGTATCATA ACTCGAAAGG ACTACCTGTT AGACCGGGCG AAGTGGACTG CCCATTCTAT CTCAAAACCG GAAGCTGCAA GTATGGAGCC ACTTGTCGCT ACAATCATCC TGAGAGGACT GCATTTATCC CCCAAGCTAC TGGGATAAAC TATTCTCTAG TTTCGTCGAA CACTGCGAAT TTAAACCTTG GGATGGTTAC ACCAGCTACC TCCTTCTACC AGACTCTTAC TCAACCCACG CTTGGAGCGC TTTCAGCAAC TTATCCCCAA AGACCTGGAC AATCAGAATG TGACTACTAC ATGAAGACAG GGGAGTGCAA GTTTGGAGAG AAATGCAGGT TCCATCACCC AGCAGATAGG TTAAGTGCAA CGAGCAATCA AGCTTCTCAA CAACCAAATG TAAAGCTGAG TCTTGCAGGG TATCCCAGAA GAGAGGGTGC GCTTAATTGC CCTTATTACA TGAAGACAGG GACTTGCAAA TACGGGGCAA CATGCAAGTT TGACCATCCT CCTCCAGGTG AGGTGATGGC TAAGACCACT TCAGAAGCCG ATGCTGCTGG AGCAACCGAC ACTACTCAAT GAGTTTCCCA GCTTTGTATA AGATAAGATG ATATCGTGTT GTAATCTTAG TTTACTTGCT ATGTTGTGCA TCTGTTTCGT TTCAAATGCT TGTCGCTCCT GAGTTCTCTT TATCATCCTA AAACGAAAAG AAATGGTTGA GCGAGTCTTC TTTTACTCAG TTGAGTTCAT AAAGGCAAAA TTGTTC 
Length1826
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4796732.. 4800657
Download Sequence
A.thaliana
AGI-codeAT3G12680.1
Descriptionfloral homeotic protein (HUA1)
TAIR curator summaryMember of the floral homeotic AGAMOUS pathway.
Alias[HUA1][ENHANCER OF AG-4 1]
Gene coexpression
MR
MR Locus Description
6.85565 Ahg489809 calcium-dependent protein kinase 4
27.5681 Ahg912012 proteasome beta subunit C1
36.3731 Ahg486799 Cysteine proteinases superfamily protein
36.5924 Ahg484185 IQ-domain 29
36.9324 Ahg927805 NADH-ubiquinone oxidoreductase-related
37.1483 Ahg484769 alfin-like 3
39.2428 Ahg471083 evolutionarily conserved C-terminal region 11
42.2493 Ahg941107 plastidic GLC translocator
43.3013 Ahg478516 lysyl-tRNA synthetase 1
43.4856 Ahg491865 novel interactor of JAZ
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression