Detail



ID : Ahg491865

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491865|fgenesh2_kg.7__1298__AT4G28910.2
Sequence
AAAGAAAATG CACAAGATAC ACATGGACAA AATCGAAACT AGAAAAAGGA AATGGTCCGT ACTAGTCCGA ACCCGAAGCC CCAATCGCCG CGAAGAAGCT CTAGGGTTTT TCTTCTGATC GTCTTCTTCC TCGGTGGTTT CAGAACTCTA TAGGTGTATC ATAGAAGCGA GAAGGCGGAT TCTGGGAAAT TGCTGGATTG TGTCTTTCAA TGGTTTTGTT TCTAAGGTAC AATCCGAGGT TTCTGAGGGT ACTCTTAAGA TCCGTTGAGC TGCTCAGTGT TTGCTTTAAA GTTTGAGAGA AAAATGGAGG ATGATAATGG GCTCGAGCTC AGCTTGGGTC TTTCTTGTGG AGGATCATCA GGAAAAGCTA AGGGTAACAA TACTAATAAT GCTGGAAGCT CCTCAGAGAA CCACAGGGCA GAAGGAGGTG ATAGAAGCGC TAAAGTGATT GATGACTTTA AGAATTTCCT GCATCCAACT TCTCAAAGAC CTGCAGAGCC GAGTTCTGGT TCTCAGAGAA GCGATTCGGG TCAACAACCT CAGCAGAATT TCTTCAATGA CCTCTCAAAA GCTCCTATCA CTGACGGTGA AGCTTCCACG AAATCTTTGT GGGTGGAGGA TGAGACACGG AAAGAAGCTG GAAACAAAAG AAAGTTTGGG TTCCCGGGGA TGAATGATGA AAAGAAGAAA GACAAGGACT CGTCACATGT TGATATGCAT GAGAAGAAGA CAAAAGCATC CCATGTTTCA ACCGCGACAG ATGAAGGATC AACAGCTGAT AACGAAGATG TAGCAGAGTC TGAAGTAGGT GGTGGTTCTT CTTCCAACCA CGCAAAGGAG GTGGTTCGTC CTCCCCCTGA TACAAACGTT GTGGACAACT TAACCGGTCA AAGAAGGAGC AACCATGGCG GATCTGGCAC CGAAGAGTTT ACAATGCGCA ACATGAGTTA CACTGTACCT TTCACGGTTC ATCCGCAAAA TGTCGTCACT ACTATGCCTT TCTCTTTACC GACAAAAGAG TCTGGACAAC ACGAAGCAGC TACAAGTCTA TTGCAGCCTA ATGCTAGTGC TGGAAATCTC CCAATTATGT TTGGATACTC ACCGGTCCAG CTCCCTATGC TAGATAAGGA CGGTTCAGGC GGGATTGTCG CCCTTTCTCA ATCTCCATTT GCTGGAAGAG GTCCATCAAA CTCAGCTACT GCGAAAGGCG AGGGCAAACA GCCTGTTGCA GAAGAAGGTT CATCTGAGGA TGCATCAGAG CGGCCAACAG GAGACAACAA CAACAATAAT ACCGCTTTCT CTTTCGACTT TTCCGCCATA AAACCCGGAA TGGCTGCAGA TGTGAAGTTT GGAGGATCGG GGGCACGTCC TAACCTACCA TGGGTCTCAA CCACTGGTTC AGGCCCGCAC GGTCGGACAA TCTCAGGTGT CACATACCGG TACAATGCAA ACCAGATCAA AATCGTATGC GCTTGCCACG GCTCGCATAT GTCGCCAGAG GAGTTTGTAC GGCACGCAAG CGAGGAATTC GTTAGCCCAG AATCATCCAT GGGAATGACG ACCGCGTCAG CTCACAGCTG AAAATTCGCC GCCGGAAAAA ATGTCTGAAA TCATGTAAAC AAATGGAAGG GTTTTGTAAT GAGTTTCTTT TTGGAACATA CATTTTATTA TGTTTAGTCG CTCGTTCTGA TTAAATTCTC AAGCCAAAG 
Length1709
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5171283.. 5173923
Download Sequence
A.thaliana
AGI-codeAT4G28910.2
Descriptionnovel interactor of JAZ
TAIR curator summary
Alias[NINJA][novel interactor of JAZ]
Gene coexpression
MR
MR Locus Description
9.05539 Ahg490443
12 Ahg491014 Serine carboxypeptidase S28 family protein
13.1149 Ahg941107 plastidic GLC translocator
22.6495 Ahg496800 indole-3-acetic acid inducible 9
25.3969 Ahg945666 Protein of unknown function (DUF1682)
28.8444 Ahg358984 NSP (nuclear shuttle protein)-interacting GTPase
31.1769 Ahg487299 ubiquitin-conjugating enzyme 22
31.305 Ahg471773 Transducin family protein / WD-40 repeat family protein
34.2929 Ahg947365 PRP38 family protein
34.4964 Ahg489579 seryl-tRNA synthetase / serine--tRNA ligase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression