Detail


ID : Ahg478706

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478706|fgenesh2_kg.3__1407__AT3G13225.1
Sequence
GGTTAGAGTC TGAAGAGAGA TTGTAAGAAA TCTGATGGGG AAGAGAAAAG AGCGTCGTTT CGCCGCCATG AATAGCACCG GCCGTCGTGT CAAGCTTGAT CTCTTTGCGG AACCCTCCTG AGATTTGGGT GGCTCAGATG TGCGTGATGG AGTTGAGCGG GAACAAACAG AGCTTAATGA GTTACCCAAT TCACCTTCTT CTTCAGGTGG GTTCCATCAG CTATCTTCAA AATCCGCTAT GTAGCCAAGC CCCATAGTTG TTTGTCACCA AAATTTCTTC TCAGAGTATT AGAGTGGTTG TGGCCTTGAG GACATCGTAT GACATCACTT CAGGCCAAGA CACAGTGATA TTTTGAATGA GTTGCTCTAT TTTGCAGCTT CAAGCTTTCT GGGGACTTTC TTCTGGAAAG AGCTCCTAGC GGTTCGTATG TCTCTGGCTG TTTTGGCTTG CTACGCTTTA CTGACGGCTT TGTCATTATT TGTGACAGGT CGCTGATAAA TCTTCCCCGA TGCTATTCTC TATCCTTTTT TAATTTCTAA TGCAACCTAA ACTATCACAT TGCTATTATT TTAGCAGTTC ATATAACTGA AGTCTAGGTA TGGAGTTAGT ACGGCTTCCA AATTTTGACG CTTTATTTTT TCTATTTTCA GGTCAGAAAA CAGGAAACCC TTTGCTTTTA CTTGGCCAGT ATAGTGATGA TGAGGTGGAA GAAGATTCGG ATAAGAAAGC AGATGATGCC TCTGCAGATA GTTCCTTAAC CAATAAAAAT GAGCAGGTCG ATGGATTAAT TCAAGAAGGA CACAAAGATA CAAATATCAA ATCAGGTGCA GTTACCACAA TGCAGATGGC TGACCAACAG CAGGCAGGGG AGAATTCTTC TGCACTTGAT TATAGAGCTG AAGGAGAAAG TGGTTTTGTC ACAGTGAGTA ACTCAACAAT CTTGGATGGA CTAAATAAGC AGACAGATCC CTCAGTTCAA GCATCTGGCA GCGTGTCTTT GGAGCACCAG GCTCCCACAG ATGTTACTTC GCAGTGGAAG ATGATTTTGC ATGAGGAGAG CAATCAGTAT TACTACTGGA ATACAGAAAC TGGGGAAACT TCGTGGGAAA TTCCTACAGT TTTGACTCAA ACTGCCTGTG CATATGGGAC TGGGTACAAT GAGTCTGGGC CCATGGTTAC AGATGAGTCC ACATTGATTT CTGGTGTTGA ACCAAGCTAT TTCCTACCCG TGCAAAATAG TTTCACAGGA ACTGACTATT CGACTTTTCC AACTGTTGAG CTGGATGAGA GAAACAAAAA TGAAGATCTA TATGTCAAAA GTTTAGGAAC AGATGGTCAT CAAGTTGAAT GTCGGATAGA CTCTGTTGTT AGTTGTCAGG AGGACCTTTC AAGGCCAGGA AATTCAGATC ATGTGCATAC TAATTTTGAT GCAGGAGCGG CTACTGACCT CCCATCTCGC TTGTTGAGTC AAATCGAAGG CTTACTGGAG AAGCTGAGGT CTCTGAAGAG GTCGCATGGG AACTTTCACA GCAATGAGCA GATAACAAAG TACATTCTGG AGGTTGAAGT CAGACATTCT GATGTAAAGG CGCTCATATT GGATACCTCA CCTTTACTTT CTTTTTGGCT TCACACTGAG AAACAACTTA AGCGTCTGGA AGATAGTGTT AACGATGAGA TTTACCAGCT TGCAAAATCT GCAGTAATGG ATGAAATTGC AGAAACTAAC AAAAGCCCTC CCGAAGAAAA GTTGGTAGCA GATGCTAATA CAGAGAGTGA ATCCGAGGGC AGTGAGAGAG ATGGAGAGCT AGCTCTATCT GGAAAATCTC TTCATTCAGA TGGATCAGCT GATGTGATCG GCGATGGATC TCCTAAACAC TCCCCAAGTC ATCCAGCTGG GCAGTCTGAT ATTACTCCTT CAACTGAGAT GCTTCAGAAG GCTGGCTCCC CAGATGTGGA AGATATTGAC ATGGATGTGG ATATGGAGGT TGAAGAATCA GTTCCAGTGT CTTCTGTTCA AGTGATAGAT ACTTCTGATG GTAAGATATT CAGCCAAACA GAGCCATCCA ACCTCCATGC AGATGTTCCA CTACCTCCGG GTGAGGAATG GATTCCACCA CCGCCGTCTG ACAGTGAAGA TGTTCCTCCG CCGCCACTAG ACAGTTATAG CGAACCAATT CCCCCACCAC CTGAAAATGG CCATTTCCCT TCATCTTTGT CCAGTGATTC TCTTGGAGTT CCCTATACTG TACCTCAATC TTATATGCAG CAATCTGCTG ATTATGCGAC ACAATACAAC TTATCCTATC CAGAGTCCAA TTATCAATAT ACCAATTCTG TTGCTCTAGA TCCTAATACT CAGTTCTATG GCCATGTCGA TGAATCTCAA GTTTCTCTTC CCCAGTCGAC ATTTTATTAT GAAACTGTTC CTGGTACAAG TGAAGTTGCT CCCACAGCAG CCAGTGCTGG TGAAGCTTAT TATGATTTCA ATGGTGCAGC TCCACTTTTT CCTATCATTA GCTCCACGGA GTCATCGCTA CATCACAGTG GAGTTGGTTC TGCTAATCAC TACATCTCAA GCAATTCTTC TACAGTTGTA GTGCCTAGTT CGAGAACCAA TGACTTTGCT GAGATTGCAT CTTCGGCAAC TACTTCTCAA TCCACAGATG TTACAGGTGA ATCGTCTCTA TTAGCAAAGG GTCAAACGAA AGTGAAACGG CTAAAAAAGC GGACAGTAGC TGCTACATCC ACATTGAGGT CAAATAAAAA GGTTTCGAGT TTGGTTGACA AGTGGAAAGC TGCGAAAGAG GAGCTAAACG ATAGTGAAGA AGAAGAAGAT GATTCCGGAA TCCTAGATAG AAAAAGAAAA CGAGAAATTG AAGAATGGAA ATCTCGACAA ATCGCAAGTG GAGAGGCTAA AGACAACGCA AATTTCCAAC CTCTCGGTGG TGACTGGCGT GAGAAAGTGA AGCGGAAGAG AGAACGAGCC GAGAAGTCTC AGAAGAAAGA CCCCGAAAAG CAGCAAAAGC CTGATCTAAC CAAACTCTCA GCAAATCTCC CATCGGGATG GCAGGCATAT TGGGACGAAT CTACCAAAAA AGTTTACTAT GGGAATACAA GTACATCTCA AACTAGTTGG ACACGACCCA CTACCTGAAC CTCAATTACT TTCTCGACCC ATTTTTTTAC TATTTCTTCT GTGATACATT TGTTTTAGAT TTCTTTCTTC TCTTATCTTT ATGTAAATTT ATTACAGAGC TAGTGTTATC ATTGTACCAT TTCCC
Length3285
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5046917.. 5051089
Download Sequence
A.thaliana
AGI-codeAT3G13225.2
DescriptionWW domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2 Ahg479589 ubiquitin-specific protease 14
2.44949 Ahg929022 histone acetyltransferase of the CBP family 5
9.59166 Ahg492650 plant UBX domain-containing protein 3
10.8628 Ahg488893 RNA-binding (RRM/RBD/RNP motifs) family protein
11.6619 Ahg321074 RNA-binding (RRM/RBD/RNP motifs) family protein
13.4164 Ahg477252
15.8745 Ahg952367 SPFH/Band 7/PHB domain-containing membrane-associated protein family
18.1108 Ahg484121 sodium proton exchanger, putative (NHX7) (SOS1)
18.2209 Ahg328819 Tetraspanin family protein
18.303 Ahg318458 calmodulin binding;transcription regulators
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression