Detail



ID : Ahg492803

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492803|fgenesh2_kg.7__2236__AT4G20830.1
Sequence
GAACACGAGA CCCAAGAACA AAAAAAGAAA AGATCCCATT TTTCACAAAA TGCTCACGAC ACCTCCACGA ACCTTTGTCT CTGTCCCTTT CTTCTTCTTC CTCCTCTTCT TCTCTCTACC TCTCTCATCT CTCTCTCAAC CATCTCCTTC CTCGTCGAGC TCTGTATACA ACTCTTTCCT CAAATGTTTC TCCGACAAGA CGAAATCTCC ACAAACCCAA ATCACTGACA ATGTCTTCTC TCAGAGCAAT CCTTCTTTCT CCTCCGTCCT CCGTGCTTAC ATCCGCAATG CGAGGTTCAA CACTTCATCT ACTCCAAAAC CCACCATCAT AATCACTCCT CGCTCCGAGA GCCACGTCAG CGCCGCCGTC ACTTGCTCAA AAACCCTAAA TTTCCTCCTC AAAATCCGAA GCGGCGGTCA TGATTACGAT GGTCTCTCTT ACATTTCCGA TAAACCCTTT TTCATCCTCG ACATGTCGAA TATCCGTGAT GTCTCTGTAG ATATCGCCTC GAATTCGGCT TGGATCTCCG CCGGAGCGAC TCTCGGAGAG GTTTATTATC GGATTTGGGA GAAAAGCAAA GTCCATGGAT TCCCTGCCGG AGTTTGTCCG ACGGTTGGTG TTGGTGGCCA TTTAAGCGGC GGTGGTTACG GTAACATGTT GAGAAAATTC GGATTATCTG TGGATTACGT TGAGGATGCG AAGATCGTCG ATGTAAACGG TCGGGTTTTA GATCGGAAAT CAATGGGTGA GGATCTTTTC TGGGCGATTA CCGGTGGAGG AGGAGGTAGC TACGGCGTCG TTTTGGGATA CAAGGTCAAG CTTGTTCCTG TGCCATCGAT CGTTACGGTT TTTAGAGTGG AGCAGTATAT GGATTCAGGA GCTGTGGATA TGGTTTATAA ATGGCAATCG GTTGGTCCGA AAACCGACCG GAATCTGTTT ATGAGAATGT TGATTCAACC AGTTACGAGG AAGAAGGTGA AGACTGTGAG AGCTTCTGTG GTTGCTCTGT TTTTAGGCAG AGCAGATACA GTTGTTGCTT TGCTTCGTAA GGAGTTTCCT GAATTGGGTT TAAAGAAGGA GAATTGTACG GAGATGACTT GGTTTCAGTC TGCTTTATGG TGGGATAATC GTGTTAACGC TACTCAGGTT GATCCTAAAG TGTTTCTTGA TCGGAATCTT GATACAGCGA GTTTCGGGAA GAGGAAATCG GACTATGTCG CGACTGCGAT TCCTAGGAAA GGTATTGAGT CTTTGTTCAA GAAGATGATC GAGTTAGGGA AAATCGGGCT TGTTTTCAAT CCGTATGGAG GGAAAATGGC GGAGGTTGCG GTTAACGCGA CGCCATTTCC TCATCGAAAC AAGCTTTTCA AGATTCAGTA CTCTGTGAAC TGGAAAGAAA ACTCTGCAGA GATAGAGAAG GGGTACTTGA ATCAGGCTAA GGTGCTTTAC AGTTTCATGA CCGGTTTTGT GAGCAAGAAC CCTAGGAGTG CGTACTTCAA TTACCGGGAT GTGGATATCG GTGTGAATGA TCATGGGGTG AATAGTTACA AGGAAGGAGA GGTGTATGGA AAGAAGTATT TTGGAGAGAA TTTCGATCGA TTAGTGAAGA TTAAAACCGC GGTTGATCCC GGGAATTTCT TCAGGAATGA ACAGAGTATA CCTACCTTGA AAAATGCAAA GGGAACGTTG TTGCCTGAGC CGGGAAAGGC GAAACGGTGG TCACGAGCTG GAGGAGCCAC CGTAGTTGCG ACGGTGGTCT TACATGTCTT CTAGAATCTT GAGATTGTTT TTTGTTTTGT TTTGAATTGT TGAGTGATGA TATCTCTTCA TAAGATGAAC AGAGCCTCAC TCTTTCAGAT CTTTCTAAGT TATCTGAAGT AGTTGCAAGT GTTTTTAAAG GTTGAGATTT GCATTAGAAA CAGAGCATAC AATGAAGTGT TAGTGAGTGG G 
Length1951
Protein Sequence
Protein Residue
Map Locationscaffold_7: 8958589.. 8960927
Download Sequence
A.thaliana
AGI-codeAT4G20830.1
DescriptionFAD-binding Berberine family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.60555 Ahg940069 NDR1/HIN1-like 3
5.19615 Ahg478781 Glycosyl hydrolases family 32 protein
6.7082 Ahg485842 homolog of carrot EP3-3 chitinase
6.9282 Ahg889847 cysteine-rich RLK (RECEPTOR-like protein kinase) 11
10.0499 Ahg492969 NOD26-like intrinsic protein 1;2
10.9087 Ahg943574 Chitinase family protein
10.9545 Ahg476236 Cupredoxin superfamily protein
11.4018 Ahg495077 nitrate transmembrane transporters
13.4164 Ahg479720 Receptor-like protein kinase-related family protein
13.6015 Ahg494916 receptor-like protein kinase-related family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression