| Annotation |
|---|
| Description | jgi|Araly1|941577|scaffold_602121.1 |
| Sequence |
GAGAAAACGA AGAAGAAGAT ATGACGATTA AACCGGCGGT TCGTATTTCC GACGGGAATC TAATCATCAA GAACCGGACG ATTTTAACCG GTTTACCAGA TAATGTCATC ACGACGTCTG CATCGGAGGC TGGACCGGTC GAAGGAGTCT TCGTCGGAGC TGTATTCGAC AAGGAAGAGA GTAAACACGT CGTACCGATC GGTACGCTTC GTAATTCCCG GTTTATGTCT TGTTTTCGGT TTAAGCTTTG GTGGATGGCC CAGAGAATGG GCGAGATGGG CCGGGATATT CCATACGAGA CGCAGTTCTT ATTGGTCGAG AGCAACGATG GGTCCCACCT TGAACCTGAC GGAGCTAACC AGAAAGTTTA CACCGTCTTC TTGCCGTTAA TCGAAGGATC TTTCCGTTCG TGTCTCCAAG GAAACGTTAA CGATGAGGTT GAGCTCTGTT TGGAGAGTGG TGACGTCGAC ACTAAACGGT CGTCGTTTAC TCACTCTCTT TATATTCACG CCGGTACAGA TCCGTTTCAG ACGATAACGG AAGCTATTCG TACCGTTAAG TTGCATCTGA ATAGTTTCCG TCAGCGTCAC GAAAAGAAAC TTCCAGGGAT CGTTGACTAC TTCGGGTGGT GCACTTGGGA CGCGTTTTAT CAAGAAGTGA CCCAAGAAGG CGTCGAAGAT GGTCTTGAGT CTCTCTCCGC CGGTGGTACG CCGCCGAAGT TTGTCATTAT CGACGACGGT TGGCAATCCG TTGAGAGGGA TGACACGGTG GAGACCGGAG ATGAGAAGAA AGAGCAGGCG GTTTCTCGAT TGACCGGGAT TAAGGAGAAT GAAAAGTTTA AGAAGAAGGA TGATCCAAAC GTTGGGATTA AGAACATTGT CAAGATTGCC AAGGAGAAAC ACGGTTTGAA ATACGTTTAC GTGTGGCACG CGATAACGGG TTATTGGGGC GGAGTTAGAC CCGGGGGAGA ATACGGATCT GTGATGAAGT ATCCTAATAT GTCAAAGGGT GTGGTGGAGA ACGATCCAAC GTGGAAGACG GATATAATGG CGCTGCAAGG GTTGGGTTTG GTTAGTCCCA AGAAAGTGTA TAAGTTCTAC AATGAGCTTC ATAGTTACTT GGCTGATGCT GGTGTGGACG GTGTGAAAGT GGATGTGCAG TGTATATTGG AGACTTTGGG TGGTGGTTTA GGCGGTCGGG TTGAGTTAAC TCGTCAGTTT CATCAAGCTC TTGACTCCTC TGTTGCAAAA AACTTCCCTG ACAATGGCTG CATTGCTTGT ATGAGCCACA ATACGGATGC TCTCTACTGC TCGAAGCAAG CAGCTGTGAT TAGAGCATCA GATGATTTCT ACCCACGCGA TCCGGTGTCT CACACCATCC ATATAGCTTC GGTTGCATAC AACAGTGTGT TCTTGGGAGA GTTTATGCAG CCTGACTGGG ATATGTTCCA TTCCGTGCAC CCTGCAGCAG AGTACCATGC CTCTGCGAGG GCCATCAGTG GTGGGCCTCT CTATGTCAGT GATGCTCCTG GAAAGCACAA CTTTGAGCTT CTAAGAAAGC TTGTATTGCC TGATGGATCG ATTCTTCGTG CTCGATTGCC TGGTAGACCG ACTCGCGATT GTTTGTTCGC AGATCCTGCC CGTGATGGTG TCAGCTTGCT AAAGATATGG AACATGAACA AGTACACTGG AGTTCTTGGC GTGTATAACT GCCAAGGAGC AGCTTGGAGC AGCACAGAAA GAAAAAACAT CTTCCACCAG ACAAAAACTG ATAGCCTCAC TGGCTCCATT CGTGGTCGTG ATGTGCATTT AATATCCAAG GCCTCTACTG ATCCACGGAC CTGGAATGGA GACTGTGCTG TTTACTCCCA GAGCAGAGGC GAACTTATCA TTATGCCATA CAATGTGTCT CTTCCAATCT CACTCAAAAT CTGTGAGCAC GAGATCTTCA CCGTGAGTCC CATTAAGCAT CTGGCTACTG ATGGTATCTC ATTTGCTCCG CTCGGTCTTG TAAACATGTA CAATTCGGGA GGAGCTATCG AAGGACTTAA ATATGAAGCC GAGAAGATGA AAGTGGTAAT GGAAGTTAAA GGGTGTGGCA AATTCGGATC TTACTCTTCT GTGAAGCCTA AGAGGTGCGT CGTTGAGTCA CATGAGATTG CATTCGAGTA CGATTCCTCC TCTGGATTGG TCACCTTTGA GTTGGACAAA ATGCCTGTAG AGACCAAAAG ATTACATCTG ATCGAAGTTG AGCTATGAAG AGTGATTCAT ACAATTCATT |
| Length | 2280 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 8148084.. 8150538 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G20250.4 |
| Description | Raffinose synthase family protein |
| TAIR curator summary | encodes a member of glycosyl hydrolase family 36. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell. |
| Alias | [DIN10][RS6][DARK INDUCIBLE 10][raffinose synthase 6] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.4641 |
Ahg921443 | trehalose-phosphatase/synthase 9 |
| 3.74166 |
Ahg917381 | beta-galactosidase 4 |
| 5.19615 |
Ahg323436 | BTB and TAZ domain protein 2 |
| 5.65685 |
Ahg477399 | SPFH/Band 7/PHB domain-containing membrane-associated protein family |
| 6.48074 |
Ahg487211 | Pectin lyase-like superfamily protein |
| 7.74597 |
Ahg914474 | Aluminium induced protein with YGL and LRDR motifs |
| 7.74597 |
Ahg949430 | beta-xylosidase 1 |
| 9.48683 |
Ahg489028 | 5'-AMP-activated protein kinase beta-2 subunit protein |
| 10.4881 |
Ahg488795 | Eukaryotic aspartyl protease family protein |
| 11.9583 |
Ahg486479 | beta glucosidase 16 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|