Detail



ID : Ahg478822

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478822|fgenesh2_kg.3__1523__AT3G14090.1
Sequence
AAAATAAAAA TCGAAGTGGT TTCTTACCAA AAATCGATCT CCTTCACGGA TTTTCATCTG AGAAGAATTT GAATCGGTGG AGATGGAACC GCCGGAGAAT AGTTTAGATT CCGATGGTTC GAAGTTAGAG ACGGCGGAGA GGATAATACT CCGGTGGGAC TCAGCGGCGA CTGATGGAGC TAGAGGGAAG ATGATTTTCC AAAGCGATCG TGATGAGGTG GATCGGTTTC TCCGAGCCGT TGATGAAATC CAACGGTCCT TATCTTCTGT CTCCTTCTCT TCTTCTTCCT CCTCCGCCGC CACCACAGTC GATGAACACG AGGTCAAAGC CAACTCAGCT ATCCAAATCG CCATGGCTAG ACTCGAAGAT GAGTTCCGTA ACATTCTTCT CTCCCACACA ACTACTTTCG AGCCTGATTC ACTTTTTCTT GAGGAATCAT CATCAGTCTC TCCGTCTTTA TGCGTCGAGG TTGGAGAAGA TACCACCACC GTAACTACCG AAGAAGAAGA ATTAAATTCG CCAGGTGGTT CCGGTTCAAG CCGGTTAACT CGTAGAAGAA GCAGTTACAG ATCCACTAGC AGTATACGAG AAATGGATCT GATCTCGCCG GAAGCAGTTT CTGATCTGAG ATCGATTGTT CAACGAATGG TCGCCGCCGG TTACTCTCGT GAGTGTATCC AAGTATACGG AACTGTTCGC AAATCAGCCA TGGAAACAAT ATTTAAGCAG CTTGGGATTG TGAAGATAAG CATTGGAGAT ATCAGGAAAT GGATTCGTGC AGCTAAAGTT TGCATTAGAG TTGTTTTCTC TAGTGAGAAG AGACTATGTG AGCAGCTATT TGATGGTATT TGCACGGCTA TGGATGAGAC TTGTTTCATG GAGACAGTGA AGGCCTCTGC TCTGCGACTT TTCACTTTCC CTGAAGCTAT AAGTATCAGT AGAAGATCAC CTGAGAAGCT TTTCAAGATT CTTGATTTAC ACGATGCTTT GACCGATATG TTACCGGATA TTGAAGCAAT CTTTGACTCG GATTCTTCAG ATGCTATTAG GGCTCAGGCC GTTGAGATTC AATCGAGACT AGCGGAAGCA GCGAGAGGTA TACTTTCGGA ATTTGAGAAT GCTGTTCTTC ATGAACCTTC GATAGTTCCT GTCCCTGGAG GAACGATTCA TCCATTGACA AGGTATGTGA TGAACTACAT TGTTATGATC TCTGATTATA AGCAAACACT GGATGATCTC ATCATGTCGA ATCCTTCAAG TGGGTCTGAT CCAAACACAC CAGATATGGA TTTCACGGAG CTAGAGAGTA AATCTCCATT GGATTTGCAT TTGATATGGT TGATTGTGGT CTTGCATTTC AACTTAGAAG AGAAATCCAA GCACTATAGA GACACATCTC TATCTCACAT ATTCATAATG AACAACATCC ATTACATTGT TCAGAAAGTG AAAAGGTCAC CGGAGCTAAG AGAAATGATT GGAGACCATT ATTTAAGGAA ACTCACTGGG ATATTTAGAC ATGCTGCCAC AAACTACCAG AGAGCGACAT GGGTCAGAGT ACTGAATAGC CTGAGAGATG AAGGATTACA TGTGACTGGG AGTTTCTCCT CAGGTGTATC AAGAAGTGCA CTAAGAGAAA GGTTTAAGGC ATTCAATACA ATGTTCGAAG AGGTTCACAG GATTCAGTCC ACATGGTCGG TTCCAGATGC TCAGCTTAGA GAAGAACTCC GAATATCGCT ATCCGAGCAT CTAATCCCTG CTTATAGATC GTTTCTTGGA AGGTTCAGGG GTCATATAGA GAGCGGAAGA CACCCTGAGA ACTATTTGAA ATATTCTGTT GAAGATATCG AGACCATCGT TCTAGATTTC TTCGAAGGAT ATACCACACC ACCACACTTG AGGAGGCGAT AAAAGAAGAT GGAAAAACGG AGAGTTCGTC TTCTTTCTTT CTTTTTTCAG CCACATTAGG ATGTCATAGA AATAGAGCCA TTCTTTGAAT TTTTATTCAC GGGTTCCTGC CCGGTGGAAT AATCTCCAGG TAAACATATA TTTGTGTGTT GTTGTTTGTG CCATATGTCT TCTTTTAGTC CTGATTGATC ACAGAACCAA TAAGTACCAT GTAAATTTTG CAATGTGCCA CGTCTTCTAC TCTTTTGCTC C 
Length2161
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5525660.. 5527960
Download Sequence
A.thaliana
AGI-codeAT3G14090.1
Descriptionexocyst subunit exo70 family protein D3
TAIR curator summaryA member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
Alias[ATEXO70D3][EXO70D3][exocyst subunit exo70 family protein D3]
Gene coexpression
MR
MR Locus Description
19.8997 Ahg474077 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
25.5147 Ahg939712 Protein kinase superfamily protein
26.7021 Ahg934965 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
27.7128 Ahg477808 nucleotide repair protein, putative
28.4605 Ahg490619 FAD/NAD(P)-binding oxidoreductase family protein
32.8177 Ahg478924 Class I glutamine amidotransferase-like superfamily protein
35.9861 Ahg473072 vascular plant one zinc finger protein
36.7831 Ahg495073 C2 calcium/lipid-binding and GRAM domain containing protein
37.7359 Ahg487900 RING/U-box superfamily protein
39.6863 Ahg479443 fucosyltransferase 11
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression