Detail



ID : Ahg478869

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478869|fgenesh2_kg.3__1570__AT3G14450.1
Sequence
ATGGCTACGG TCACTGAGAT GCCCACTGAT GTTGTTGTTG TCGACGATGT TAATGGAATT AGTACCAAAA GCGATGGCGA AAAGATCATA GATGAGGGAA TTGAGAAGAG CTCGATCACG TGTTCTAAAA CCGAGACTGA ATCCGAGCTC AAACCCAAAT CCGACTTTGA TATGCAGAAG CTTGTGGCTA TGTTCAAGAA ACTCAATCCT TTGGCCAAAG AGTTTTTTCC TTCTTACTAT GATCCGAAGA AGAACCATCA GGTGGGGAAA GCTAATCAAT TTCTATCGGC TGACGATTTT GCCACCACCA ATAAACAATC TGGTGAAGAA TTTGATCCTG ATGCCAAAAA GGATGACAAT ACGCGCAAGA GAAGAAACTA TAGCCAAGGG AGGAGGAGGT TAACTGGAAG AATTTCTAAG GCTCAAAGAG AGGATAGTAT TAGAAGAACA GTTTATGTTT CTGACATTGA CCAGAGTGTG ACTGAGGAGG GTCTTGCAGG CTTGTTTAGT AACTGTGGAC AAGTTGTTGA CTGTCGAATT TGTGGCGATC CACATTCAGT TCTTCGATTT GCGTTTGTTG AGTTTGCTGA TGACCAGGGC GCACGAGAAG CTTTAAGCCT TGGTGGAACA ATGCTCGGGT TCTACCCGGT GAGGGTCAAA AACTGCCATT CTACCAGTGA ATCCCACATT TCTTCCAAGG GTAAATGCTC CGATTCAGAA GATGAAAGGG AGATGTGCAC AAGGACAATC TATTGCACAA ATATCGACAA GAAGGTTTCT CAAGCTGATG TGAGAAACTT CTTTGAGTCT GCATGTGGTG AGGTAACTCG TCTGAGGCTT CTTGGCGATC AATTGCATTC AACTCGCATA GCTTTTGTTG AATTTGCTCT GGCAGATAGT GCACTTAGGG CGCTCAATTG CAGCGGGATG GTCGTTGGAT CCCAACCGAT AAGGGTAAGT CCATCAAAGA CACCAGTGAG GCCAAGAATC ACTCGACCAC CATCGACAAA CTAG 
Length1014
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5753480.. 5755502
Download Sequence
A.thaliana
AGI-codeAT3G14450.1
DescriptionCTC-interacting domain 9
TAIR curator summaryRNA-binding protein, putative, contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies). Contains PAM PABC binding domain.
Alias[CID9][CTC-interacting domain 9]
Gene coexpression
MR
MR Locus Description
16.4621 Ahg488618 root cap 1 (RCP1)
20.1246 Ahg470308 debranching enzyme 1
28.6356 Ahg353127 accelerated cell death 2 (ACD2)
35.2136 Ahg940699 integral membrane TerC family protein
46.3033 Ahg930731
61.6766 Ahg323006 Glycosyl transferase, family 35
70.7107 Ahg939752 starch branching enzyme 2.2
72.6636 Ahg494650 actin-related protein 9
78.1153 Ahg931905 myb-like HTH transcriptional regulator family protein
79.975 Ahg489823 RAB GTPase homolog G3A
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression