Detail



ID : Ahg478892

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478892|fgenesh2_kg.3__1593__AT3G14790.1
Sequence
TTTTATTTAT TTCCATTGAT CTCTCCCCTC TCCTCGAATT TTCCCTCCTT TTAAACCATC TCTGCATATA TTCTTCAAGC TTAAGGTTTG ATCTTCATCT GAAATCGATC CGGTACGATG GCTACATATA AGCCCAAGAA CATCCTCATC ACTGGTGCTG CTGGATTCAT AGCCTCCCAT GTTGCCAACA GACTAGTTCG TAGCTACCCT GACTACAAAA TCGTTGTGCT TGACAAGCTT GATTACTGTT CTAACCTGAA AAACCTTAAT CCTTCTAAAT CCTCTCCTAA CTTCAAGTTT GTGAAAGGAG ATATCGCCAG TGCTGACCTC GTCAACTACC TTCTCATCAC TGAAGAAATC GATACCATTA TGCACTTTGC TGCTCAAACC CATGTTGACA ATTCTTTCGG TAATAGCTTT GAGTTTACTA AGAATAATAT TTATGGTACC CATGTTCTTC TGGAGGCTTG TAAAGTCACT GGCCAGATCA GGAGGTTCAT CCATGTGAGT ACTGATGAGG TCTATGGAGA GACTGATGAG GATGCTTCTG TGGGAAATCA CGAGGCTTCT CAGTTGCTAC CGACTAATCC ATACTCTGCT ACTAAAGCTG GAGCTGAGAT GCTTGTTATG GCATATGGTA GATCATATGG GTTGCCGGTT ATAACAACTC GCGGGAACAA TGTTTATGGT CCTAACCAGT TTCCTGAAAA GTTGATTCCT AAGTTCATCC TCTTGGCTAT GAATGGGAAG CCTCTCCCAA TCCACGGAGA TGGATCTAAT GTGAGAAGCT ACCTCTACTG CGAAGATGTT GCCGAGGCAT TTGAGGTTGT TCTTCACAAA GGGGAAGTTA ACCATGTCTA CAATATAGGG ACAACGAGAG AAAGGAGAGT GATCGACGTG GCTAATGACA TCAGTAAACT CTTTGGGATA GACCCTGACT CCACCATTCA GTTTGTGGAG AACCGCCCAT TCAATGACCA GAGGTACTTT CTGGATGACC AGAAGCTGAA GAAATTGGGA TGGTGTGAGC GAACCAATTG GGAAGAAGGA CTGAGGAAGA CAATGGAATG GTACACTGAG AACCCTGAGT GGTGGGGAGA TGTTTCTGGA GCTCTGCTTC CTCATCCACG GATGCTGATG ATGCCCGGTG ACCGACACTC TGACGGCTCT GACGAGCACA AGGACTCGGA TGGTAATCAG ACATTCACGG TGGTTACTCC CACCAAGGCT GGTGTTTCCG GAGACAAAAG ATCCTTAAAG TTCCTCATCT ATGGGAAGAC TGGGTGGCTC GGTGGTCTTC TGGGAAAACT ATGTGAGAAG CAAGGGATTT CATACGAGTA TGGAAAAGGG AGACTAGAAG ACAGGGCTTC TCTCATGGCC GATATTCGCA GCATCAAACC AAGTCATGTC TTCAATGCCG CCGGTTTAAC TGGCAGACCC AATGTTGACT GGTGTGAATC TCACAAAACC GAAACCATCC GAGTCAATGT TGCTGGAACT TTGACTCTGG CAGATGTTTG CAGAGAGAAT GATCTATTGA TGATGAACTT TGCCACCGGT TGTATATTTG AGTATGACGC TGCACATCCA GAAGGTTCAG GGATTGGTTT TAAGGAAGAA GATAAACCTA ATTTCACTGG TTCTTTCTAC TCAAAAACAA AGGCAATGGT TGAAGAGCTT CTAAGAGAAT TTGACAACGT ATGCACTTTG AGAGTGCGGA TGCCAATCTC ATCCGACTTA AATAACCCGC GAAACTTTAT CACGAAGATC TCGCGTTACA ACAAAGTGGT GAACATCCCA AACAGCATGA CCATACTAGA CGAACTCTTG CCAATCTCAA TTGAGATGGC GAAGAGGAAC TTAAGGGGAA TATGGAACTT CACCAATCCA GGAGTGGTGA GCCACAACGA GATACTAGAG ATGTACAAGA GTTACATTGA GCCGGATTTC AAATGGTCCA ACTTCAATTT GGAAGAACAG GCTAAGGTCA TTGTCGCACC ACGGAGCAAC AACGAGATGG ATGGTTCTAA GCTCAGCAAG GAGTTTCCAG AGATGCTTTC CATCAAAGAT TCGTTGATCA AATACGTCTT TGAACCTAAC AAGAGAACGT AAAACACAGA CACACACATA CTTCCCCTCT CTCTGTTCAC TATAATGTTT CTACAATAAT TTTATCATAT GATTCATTTA CTCTTTTTTG CATTCTACGC CTTACATGTA GCTCTCTTCA CTCATTCTAC TTCACTACAC ATCTTTGTTT TACACAGATC GATTTATTGG AGTTG 
Length2285
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5846900.. 5849622
Download Sequence
A.thaliana
AGI-codeAT3G14790.1
Descriptionrhamnose biosynthesis 3
TAIR curator summary
Alias[ATRHM3][RHM3][ARABIDOPSIS THALIANA RHAMNOSE BIOSYNTHESIS 3][rhamnose biosynthesis 3]
Gene coexpression
MR
MR Locus Description
6.245 Ahg921765 nuclear transport factor 2A
8.94427 Ahg928964 Ubiquitin-conjugating enzyme/RWD-like protein
11.1355 Ahg473392 early-responsive to dehydration stress protein (ERD4)
13.1909 Ahg486740 Carbohydrate-binding-like fold
14.2478 Ahg481432 Protein of unknown function (DUF810)
14.6969 Ahg490751
22.2711 Ahg492127 hydroxyproline-rich glycoprotein family protein
30.8221 Ahg937978 NAD(P)-binding Rossmann-fold superfamily protein
33.2265 Ahg470642 Ribosomal protein S5/Elongation factor G/III/V family protein
37.2425 Ahg928388 GPI transamidase component PIG-S-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression