| Annotation |
|---|
| Description | jgi|Araly1|485048|fgenesh2_kg.5__1040__AT3G46780.1 |
| Sequence |
GCACTCGCCA TGGTGTCTCA TCTTCAATGT ATGGCATCCA CATTGTTTAC TTGAGGTCCA AGCAAAAAAT CTAAGCTCGT CGACCTCCTC TTAATGGCTT CAAGTTCAAC TTCATTCCCG TTAACCATCG CGCCACCACA GGGTGTCAGG TTTAACCGAA GAAAACCACG GTTAACCGTG TGGGCTAAGC AAACGGTGTT TCAATTCGGG AAAACGAAGG GTGATGATGA CTCGGAGGGG AAACCAAAAG GGAAGAACCC GTTTCAGTTT GACTTCGGTA AGTTACCGGA CATCAAGTCA CTGATACCAG TTGTGTCGAA TCCTTCTACC GGTTTAGTGT TTGGTAATAA CAGAAAGAAA GATCCTGGTA CGATTTTTGT GGCCGGTGCT ACGGGACAAG CTGGTATACG CATAGCTCAA ACGCTCTTGC AACGAGGATT CAGCGTTCGA GCCGGTGTTC CTGACATTGG AGCTGCCCAA GACCTCGCTC GTGTCGCGGC TACTTACAAG ATTTTATCAA ATGACGAAGT CAAGAGGCTA AACGCAGTTC AATCCCCCTT CCAAGACGCA GAATCAATCG CAAAAGCGAT TGGAAACGCG GCTAAAGTTG TTGTTACGGT CGGGGCAACA GAGAATGGTC CTGACGCCCA AGTCTCGACC TCAGACGCTC TGCTCGTGGT CCAAGCGGCT GAGCTCGCTG GTGTAAGCCA TGTGGCGATC GTTTATGACG GGAGCATCAG CGGATCCACG TACAACGTGC TAGACGGGAT TACTTCGTTT TTCGGCAACC TTTTCGCAAA ATCTCAGCCA TTGACTATCT CTGACCTCAT CGAGAAAGTA GCTCAAACGG ACGTGGCGTA CACGCTCATA AAGACGAGTT TGACGGAGGA TTTCTCGCCG GAGAAAGCTT ATAACGTCGT CGTTTCAGCT GAAGGGAGTA ACAGAGGCAG TGGCAGTAGT TCGTCCGAGG CCTACAAAGT CCCGAAGTTG AAGATTGCGT CGCTGGTTGC AGACATTTTT GCGAACATGG CCGTGGCAGA AAATAAGGTG GTGGAAGTTT CTACAGATCC ATCAGCACCG TCGCGGCCAG TGGACGAGCT TTTCAGTGTA ATCCCGGAAG ATGGGAGGAG AAAAGTGTAC GCAGATGCGA TTGCAAGGGC AAGAGCAGAG GAAGAAGCTA AAGTTGCAGC TGAGAAAGCC CGAGAGGCAG CAGAAGCAGC GAAAGAGTTT GAGAAACAAA TGCAAAAGCT ATCTGAGAAA GAAGCAGAAG CTGCTAGCTT AGCTGAGGAT GCGCAGCAGA AAGCAGAAGC CGTGGGAATC AAAGTGGACG GTCTATTTAA CAAGGTGAAA GATATCGGCT CAGGTCTCTC TTGGAATAAA CTCGGTTCTC AGTTCGCAAC GGCGGTTCAA AACGCTTCAG AGACGCCTAA AGTGCAGGTT GCTACGGTCA GAGGACAAGC AAAAGCAAGA AACTTGCCAC CCAAGAAAGC AGTGGTGAAG CAGAGACCAT CATCTCCATT TGCATCCAAA CCGAAGGAAG AACGTCAAAA GAAGCCAGAG AAAGAGGTAA GGAAAGTGTT TGGAGGACTG TTTAAGCAAG AGACCATCTA TGTCGACGAC GACTGAAAAC GCCATAAACG ATGTCGTTTC AGAGCTCCGT ACAGTTTCCT TTTTTTCTTT CCTTCTGTTT CAAGTTAAAT TTCTGTAATC ATATGATAAA ACTATATATA AAAAA |
| Length | 1735 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 12190360.. 12192793 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G46780.1 |
| Description | plastid transcriptionally active 16 |
| TAIR curator summary | |
| Alias | [PTAC16][plastid transcriptionally active 16] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3 |
Ahg490167 | photosystem II subunit Q-2 |
| 3.87298 |
Ahg472262 | Cupredoxin superfamily protein |
| 5.2915 |
Ahg492755 | photosystem II subunit QA |
| 5.74456 |
Ahg927000 | plastocyanin 1 |
| 5.91608 |
Ahg494137 | Ribulose bisphosphate carboxylase (small chain) family protein |
| 8.94427 |
Ahg473640 | photosystem I subunit F |
| 9.48683 |
Ahg493326 | Deoxyxylulose-5-phosphate synthase |
| 9.79796 |
Ahg494136 | Ribulose bisphosphate carboxylase (small chain) family protein |
| 10.247 |
Ahg491882 | Photosystem I reaction centre subunit IV / PsaE protein |
| 10.3923 |
Ahg923621 | Photosystem II 5 kD protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|