Detail



ID : Ahg490588

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490588|fgenesh2_kg.7__21__AT4G38240.1
Sequence
GTTTGTCGTC GATATGGCGA GGATGTCTTG TGACTTGAGA TTCCTTCTCA TCCCGGCCGC TTTCATGTTC ATCTACATCC AGATGAGGCT TTTCCAGACG CAATCACAGT ATGCAGATCG CCTCGGTTCC GCTATCGAAT CTGAGAACCA TTGCACTAGT CAAATGCGTG GCCTCATTGA TGAAGTTAGC ATCAAACAGT CACAGATTGT TGCTCTCCAA GATGTGAAGA ACCGCCAGGA CCAAGAACTT GTGCAGCTTA AGGATCTTAT CCACACGTTT GAAAAAAAAG GAATTGCAAA ACTCATTGAA GCTGGACAGA TGCCTGTGGC TGCTGTTGTG ATTATGGCCT GCAGTCGTGC AGACTATCTT GCAAGGACTG TTAAATCAGT TTTAACATAT CAAAGTCCCG TTGCTTCAAA ATATCCTCTA TTTATATCTC AGGATGGATC TAATCAAGCC GTCAAGAGCA AGGCATCGAG CTATAATCAA CTAACATATA TGCAGCACTT GGATTTTGAA CCAGTGATCA CTGAAAGGCC TGGCGAACTG ATTGCGTACT ACAAGATTGC ACGTCACTAC AAGTGGGCAC TGGACCAGTT GTTCTACAAA CACAAATTTA GCCGAGTGAT TATACTAGAA GATGATATGG AAATTGCTCC AGACTTCTTT GATTACTTTG AGGCTGCAGC TAATCTCATG GATAGGGATA AAACCATTAT GGCAGCTTCA TCATGGAATG ATAATGGGCA GAAGCAGTTT GTACATGATC CCTATGCACT TTACCGATCA GATTTTTTTC CTGGCCTTGG GTGGATGCTG AAGAGATCGA CTTGGGATGA GTTATCACCT AAACTAAAGG AAAACCATAA AGACCGCCAA TTTATTCGAC CTGAAGTCTG CAGAACATAC AATTTTGGTG AACATGGGTC TAGTTTGGGG CAATTTTTCA GTCAGTATCT GGAACCTATA AAGCTAAACG ATGTGAAGGT TGACTGGAAA GCAAAGGACC TGGGGTACCT AACAGAGGGA AACTATACCA AGTACTTTTC TGGCTTAGTG AGACAAGCAC GACCAATTCA AGGTTCTGAC CTCGTCTTAA AGGCTCAAAA CATAAAGGGT GATGTTCGTA TCCAGTATAA AGACCAAGCA GAGTTTGAAC GCATTGCAGG GGAATTTGGT ATATTTGAAG AATGGAAGGA TGGTGTGCCT CGAACAGCAT ATAAAGGAGT AGTGGTGTTT CGAATCCAGA CAACAAGACG TGTATTCCTG GTTGGGCCAG ATTCTGTAAT GCAGCTTGGA ATTCGAAATT CCTGATGCAA AACATATGAA AGCAAAAGAA TATTTTCGAG CGCATGCAGC CTCCTTCTAG CAGCTGTTAG GTTGTATTAT TATTTACGGA TGAGTTTGTA GAGGGGTGGG GTTAACTTTA ACAGAAAGGA AGCTCTGGTG ACCTGTCTCA TTGGCTTAGA TGTTATGGGA ACCCCTGGAA ATATATTTCA GTCGTTTTAA AACTGATTGT CTTGTGGGTA TCATCTTATA CGAAAGCAAA TCATTCTATG CAGTTTTTCA TCTTCCCACT TCTTATGGCT TCTTTATTGC TAGTGTATAT ATCTCTTCAA ACATGTGCAT ATGTACTAAA TAATGCGTGT TGCTTCAAAG AAGTAATTTT TA 
Length1672
Protein Sequence
Protein Residue
Map Locationscaffold_7: 54563.. 58051
Download Sequence
A.thaliana
AGI-codeAT4G38240.1
Descriptionalpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative
TAIR curator summaryEncodes N-acetyl glucosaminyl transferase I, the first enzyme in the pathway of complex glycan biosynthesis.
Alias[CGL][CGL1][GNTI][COMPLEX GLYCAN LESS][COMPLEX GLYCAN LESS 1][N-ACETYLGLUCOSAMINYLTRANSFERASE I]
Gene coexpression
MR
MR Locus Description
9.94987 Ahg943471 Homeodomain-like superfamily protein
16.4317 Ahg474701 TBP-ASSOCIATED FACTOR 6B
16.4924 Ahg479291 winged-helix DNA-binding transcription factor family protein
18.8149 Ahg476803 RNA-binding (RRM/RBD/RNP motifs) family protein
19.2354 Ahg494671 casein kinase I-like 8
24.4949 Ahg948606 chromatin remodeling 4
29.9333 Ahg344992 TraB family protein
34.322 Ahg477718 Nucleotidylyl transferase superfamily protein
35.242 Ahg475037 GPI transamidase subunit PIG-U
39.1024 Ahg350042 glucuronidase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression