| Annotation |
|---|
| Description | jgi|Araly1|472301|fgenesh2_kg.1__2255__AT1G20693.2 |
| Sequence |
TTTCGTGCGA AATTTCAATT TTTTCAATAT CCTTTATTGA TTGACCAAAG ATATTTTACA AGCCTTTCTC CACTAAGCCC TTCTCTCTTC TCTCTTGGCT TCTCACTTGA ATCTCCCTCA AATTGATCAA TCACAAATTC CTTCTTCTTC TCTCTCTCTC TTCTCGATCC CTACGAATCA ATTATGAAAG GAGCTAAATC AAAGACTGAA ACCAGGAGCT CCAAGCTCTC TGTGACCAAG AAGCCGGCTA AAGGAGCAGG GCGTGGCAAA GCAGCTGCTA AGGATCCAAA CAAACCAAAG AGGCCAGCCA GTGCCTTCTT CGTTTTCATG GAAGATTTCC GTGAGACTTT CAAGAAGGAA AACCCCAAGA ACAAGTCTGT TGCTACTGTT GGAAAAGCTG CTGGAGACAA GTGGAAATCC TTGTCAGATT CTGAGAAAGC TCCTTATGTA GCTAAGGCTG AGAAACGCAA GGTTGAATAT GAGAAGAACA TTAAAGCATA CAACAAGAAA CTGGAGGAAG GTCCAAAGGA AGATGAGGAA TCTGACAAGT CAGTGTCAGA GGTCAATGAC GAGGATGATG CTGAGGATGG TAGTGAAGAG GACGATGACT AATGGTAGCA TTAGTATAGA TGGCTGCAAA GATCTCTCTG TTTTTATTTT ATTTTACTTG AAATGTTGAT GGGGCTGATT AAAAGGGTCT TTCTTTTATC TTGTATTGCC ACAATCTCCC ACTAAAGCCC TTTGGATGGA GAAAGTGAAT TGTAGAATGT TTAGATGGTG AAAGTGAGAC TTGCAGCTCT GTACTCTTTG CTCTATAAAA CGATTTAGTT TTCTTTTCTC AT |
| Length | 842 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 8457143.. 8459105 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G20693.1 |
| Description | high mobility group B2 |
| TAIR curator summary | Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. |
| Alias | [HMG BETA 1][HMGB2][NFD02][NFD2][HIGH MOBILITY GROUP BETA 1][high mobility group B2][NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP D 02][NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP D 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.24264 |
Ahg896860 | glycine-rich protein |
| 4.58258 |
Ahg495556 | Translation initiation factor SUI1 family protein |
| 5.47723 |
Ahg344464 | Structural maintenance of chromosomes (SMC) family protein |
| 6 |
Ahg479291 | winged-helix DNA-binding transcription factor family protein |
| 6.63325 |
Ahg477103 | Ca(2)-dependent phospholipid-binding protein (Copine) family |
| 7.2111 |
Ahg947410 | glutamine synthase clone R1 |
| 8.66025 |
Ahg489590 | glutathione synthetase 2 |
| 10.0995 |
Ahg949805 | MATE efflux family protein |
| 10.8167 |
Ahg320206 | cyclic nucleotide-gated channel 6 |
| 11.8322 |
Ahg488325 | formate dehydrogenase |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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