Detail



ID : Ahg479304

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479304|fgenesh2_kg.3__2005__AT3G18140.1
Sequence
TTTTTGATCC TCAATCAGGA AACCCTAGCT TGTTCTTCTG TTGATTATTT CGAAAAAGGG GTTTGTTTGG TTTCTGGGAA TCAGCAAAAA TCACGAAATG GTTGGTTCAT TATTTCGATC GGGATAAAAT CGATCGAAAA TGAGTCAGCC TTCTGTGATT CTTGCTACAG CTAGCTATGA TCACACGATT CGATTCTGGG AAGCCGAAAC TGGTCGCTGT TACCGTACCA TTCAGTATCC TGATTCGCAT GTAAATAGGC TTGAGATAAC CCCAGATAAG CGTTATCTAG CTGCAGCTTG TAATCCTCAT ATACGGCTTT TTGATGTCAA TTCCAACAGT CCTCAACCTG TGATGACTTA TGATTCACAC ACCAACAATG TTATGGCAGT AGGATTCCAA TGTGATGGGA AATGGATGTA TTCAGGATCA GAGGATGGCA CAGTTAAGAT CTGGGACTTG AGGGCTCCCG GTTGCCAAAA GGAGTATGAA AGTGTTGCCG CAGTTAACAC TGTTGTTTTA CACCCAAATC AGACTGAATT GATATCTGGA GACCAAAATG GAAATATACG TGTATGGGAT CTCAGAGCAA ATTCGTGTAG TTGTGAACTG GTACCAGAAG TTGATACAGC TGTACGGTCT TTGACGGTTA TGTGGGATGG TACAATGGTG GTTGCTGCTA ACAACCGTGG AACATGTTAT GTGTGGCGCT TGTTGCGTGG AAAACAGACG ATGACCGAGT TTGAACCCCT TCATAAGCTG CAAGCTCATA ATGGCCACAT CCTTAAATGC CTTCTCTCTC CTGCAAACAA GTATCTAGCA ACCGTATCGT CTGATAAAAC CGTCAAAATA TGGAACGTCG ATGGTTTCAA ACTAGAGAAA GTTTTAACAG GACATCAAAG ATGGGTCTGG GACTGCGTCT TCTCAGTGGA TGGAGAATTT CTTGTTACCG CATCATCTGA CATGACGGCT AGATTGTGGT CGATGCCAGC GGGTAAAGAA GTGAAGGTAT ACCAAGGTCA TCACAAAGCC ACTGTGTGCT GTGCACTCCA CGATTAAAAC CTTTTAAGAA TTAATGAAGC TAAATTATGG ACAAACTACG ATTGTGTTAT TTGTGTTTTA GAAAACTCTT GTACATTTTA ATCGAATTCG TTCAAATTGC TCTTTATGTC TCCTCTGTGA TCAAACATTT CTCAACT 
Length1197
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7299124.. 7301251
Download Sequence
A.thaliana
AGI-codeAT3G18140.1
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summary
Alias[LST8-1][Lethal with Sec Thirteen 8-1]
Gene coexpression
MR
MR Locus Description
5 Ahg944914
5.19615 Ahg483764 golgin candidate 4
6.245 Ahg489545
6.7082 Ahg496008 Quinone reductase family protein
6.9282 Ahg475589 Cystathionine beta-synthase (CBS) family protein
7.07107 Ahg481644 nitrilase-like protein 1
8.48528 Ahg317971 ubiquitin-specific protease 13
9.16515 Ahg949042 rotamase FKBP 1
12.3288 Ahg476099 sphingoid base hydroxylase 1
12.4097 Ahg472236
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression