| Annotation |
|---|
| Description | jgi|Araly1|479356|fgenesh2_kg.3__2057__AT3G18520.1 |
| Sequence |
AGCTTCAGCT GGTTAGTAGT TTCAGTGACT ACTGAGGTAA AATGGTTGTA GAAACTCTTG AGAGGTCCTG TGAGGGTTCA AAGAGAAGAC ATGTGAATGG TGGTGATGTC GCTGTTCCTT GTTCGGGAGA TGAGTTAAGC AATGGAGATA TAAATGCAGC TCCTGGAGTT TCAGCAAAAA GAGCTAGGGT TTCAAGAGAA ATGACGTTTG AAGATATTTA CGGTGCTGAT GCATTGCTGA ATGATGATGA TGATGAGGAG GATGATTGTG ATTGGGAACC TGTGCAGGCG CCTGTGGAGT TTGTAAACTG GTGTTGCGTC AATTGCACTA TGTCGAACCC TGGTGATATG GTCCACTGTT ATATATGCGG TGAACACAAG GAATCTGGCA TCCTGAGGCA TGGATATTTA GCGTCTCCTT TTTTTAAAGA CACTGGTCTC ATTGAAGTAG AAGAGAAATA TGGAGGAAGC TCATCTGCAA CCAGCTCGAC AGCTGTTGGG TTCGACGAGA GAATGTTGCT ACACTCAGAA TTTGAAGTGA AGGCACATCC ACATCCAGAG AGACCTGATC GTCTTCGAGC TATAGCTGCT AGTCTTGCCA CAGCTGGTGT TTTTCCTGGA AGATGCTTGC CTATTAATGC AAGAGAAATC ACGAAACAAG AACTCCAGAT GGTCCACACT TCAGAGCATG TTGATGCTGT TGATACTACA AGCCAGCTTC TCTATAGCTA CTTCACCTCT GACACGTATG CTAATGAGTA TTCAGCACGT GCTGCTAGAC TTGCAGCAGG TTTGTGCGCT GATCTAGCAA CAGAAATTTT CACTGGCCGT GTAAAAAATG GTTTCGCTTT GGTTAGACCT CCGGGTCATC ATGCTGGCAT CAGGCATGCT ATGGGGTTTT GCCTTCACAA TAATGCAGCC GTTGCTGCAT TAGTAGCACA AGCAGCAGGG GCAAAGAAGG TGCTGATTTT GGACTGGGAT GTACATCATG GAAATGGAAC TCAAGAGATA TTCGAACAAA ACAAATCTGT ATTGTACATA TCCTTGCACA GACATGAGGG AGGACACTTC TATCCCGGTA CTGGAGCTGC TGATGAGGTT GGTACAAATG GTGGGGAAGG TTATTGTGTA AATGTTCCTT GGAGTTGTGG TGGAGTTGGT GATAAAGACT ATATCTTTGC GTTTCAACAT GTGGTTCTTC CCATAGCTTC TGCATTCTCT CCAGATTTTG TCATCGTATC AGCGGGATTT GATGCTGCTA GAGGAGACCC ATTAGGATGC TGTGATGTGA CTCCGGCTGG CTATTCTCGA ATGACACAGA TGTTGGGTGA TCTGTGCGGT GGGAAAATGC TAGTTATTCT GGAAGGCGGC TACAATCTTC GCTCCATATC TTCTTCTGCA ACAGCAGTGA TCAAGGTGCT TCTGGGTGAA ATTCCGGAGA ATAACCTGCC CATCGCAGCC ACGCCTTCAA GAGAAGGCCT ACAAACTGTT CTTGATGTAC TGAATATTCA AATGAAGTTC TGGCCATCAC TTGCTATCAG CTACTCCAAA TTACTCTCAG AGTGGGAAGC ACGTCTGATC GAAAACAAAA AAAATCAGAT GAAAAGGAAG CTTGTTCGGG TTCCGACATG GTGGAAATGG GGACGAAAGA AGCTTTTGTA CAAGTTTCTC TCAGCGCGTA TGATTTCAAG ATCAAAATGA TTTATGATTT TAGAAAGCAT TCTTCCTAAT CCATCGTAGG AACTGT |
| Length | 1746 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 7482254.. 7486228 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G18520.2 |
| Description | histone deacetylase 15 |
| TAIR curator summary | Encodes a protein with similarity to histone deacetylases. Plants expressing RNAi directed against this gene show a moderate resistance to agrobacterium-mediated root transformation. |
| Alias | [ATHDA15][HDA15][histone deacetylase 15] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.3589 |
Ahg483241 | Nucleoporin interacting component (Nup93/Nic96-like) family protein |
| 5.09902 |
Ahg949330 | Small nuclear ribonucleoprotein family protein |
| 11.4018 |
Ahg491436 | La protein 1 |
| 11.4018 |
Ahg332253 | |
| 12.2474 |
Ahg919681 | importin alpha isoform 4 |
| 14.0712 |
Ahg492703 | DNA-directed RNA polymerase family protein |
| 15.6525 |
Ahg479706 | peroxin 22 |
| 23.3666 |
Ahg339887 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 24.8193 |
Ahg485593 | general transcription factor group E6 |
| 26.533 |
Ahg494823 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|