| Annotation |
|---|
| Description | jgi|Araly1|494823|fgenesh2_kg.8__639__AT5G47820.2 |
| Sequence |
TCTTCCAATG GAATCTACTC CGCCGCCGGA TGATTGTTCC GTTAAGGTTG CTGTTCACAT CAGACCACTC ATCGGCGACG AAAGGATCCA AGGTTGTCAA GATTGTGTCA CTGTCATTAC CGGTAAACCA CAGGTACAAA TTGGATCACA TTCTTTTACA TTTGATCATG TATATGGTAG CTCTGGTTCT CCATCTACTG AAATGTATGA AGAATGTGCT GCCCCGCTCG TTGACGGTTT ATTTCAAGGC TACAATGCTA CGGTTCTTGC TTATGGACAG ACGGGCTCGG GTAAAACATA TACAATGGGT ACTGGCTGCG GAGACAGCAG CCAAACCGGA ATCATCCCTC AAGTTATGAA CGCTCTTTTC AGCAAGATAG AGACTTTGAA GCAGCAGATT GAGTTTCAGA TTCATGTTTC TTTTATCGAG ATTCATAAAG AAGAGGTTCA AGATTTGCTG GATCCTTGCA CTGTTAATAA ATCAGACACT ACTAACACTG GACATGTTGG CAAGGTAGCA CATGTCCCTG GGAAGCCACC AATACAGATC CGAGAAACAT CCAACGGTGT TATCACACTA GCAGGATCCA CAGAAGTAAG TGTCAGTACG TTGAAAGAGA TGGCTGCTTG CCTTGATCAA GGGTCGGTCA GCAGGGCTAC CGGTAGTACT AACATGAACA ATCAGTCCAG TCGTTCACAT GCCATTTTCA CTATCACCGT GGAGCAAATG CGCAAAATTA ATACGGATTC TCCTGAAAAC GGTGCTTACA ATGGGAGCTT GAAAGAAGAA TATTTGTGTG CCAAGTTGCA CCTAGTAGAC CTTGCTGGTT CAGAACGAGC AAAACGAACT GGTTCTGACG GTTTGAGATT TAAGGAAGGT GTTCACATCA ACAAAGGCCT CCTTGCACTT GGTAATGTCA TCAGCGCGCT CGGAGATGAG AAAAAGCGTA AAGATGGTGC CCATGTTCCT TACAGAGACA GTAAACTTAC ACGGCTTTTG CAGGATTCCC TTGGGGGTAA CAGCAGAACT GTGATGATAG CTTGCATCAG TCCTGCAGAT ATTAATGCGG AGGAAACACT TAATACTTTG AAATATGCAA ACCGTGCTCG AAACATCCGG AATAAACCTG TTGTTAATAG AGATCCTGTG TCTAGTGAGA TGCTAAAAAT GCGTCAACAG GTAGAATACT TGCAGGCAGA GCTCTCCTTA CGGACCGGAG GATCCTCATG TGCAGAAGTC CAGGTTCTTA AAGAAAGGAT TGCTTGGCTT GAAACTGCTA ATGAAGATCT TTGCCGGGAA CTTCATGAGT ACCGTAGCAG ATGTCCTGGT GTAGAGCATT TTGAGAAAGA CTTTAAAGAC ATACGAGCTG TAGATGATAT TGTTGGTTCT ATCAGACCCG ATGGGCTGAA AAGAAGCTTG CACAGTATAG AGTCCTCTAA TTACCCCATA GTTGAAGCCA CAACAGGTGA TTCAAGGGAA ATAGACGAAG AGGCAAAGGA GTGGGAGCAT AAGCTCTTGC AAAATAGTAT GGACAAAGAG TTGCATGAGC TGAACCGCCG TCTAGAGGAA AAAGAGTCTG AAATGAAGCT GTTTGACGGC TATGATCCGG CTGCCTTAAA GCAACATTTT GGAAGGAAAA TTGCAGAGGT GGAGGATGAA AAGAGATCCG TTCAGGAAGA GAGAAACCGT TTGTTGGCTG AAATTGAGAA CCTTGCTTCT GATGGTCAAG CACAGAAGTT GCAAGATGTG CATGCTCAGA ATTTAAAAGC GCTTGAAGCA CAGATTCTAG ACCTTAAGAA AAAGCAAGAG AGCCAGGTTC AACTACTGAA GCAGAAACAA AAGAGTGATG ATGCGGCTCG GAGGTTACAG GATGAAATCC AATCTATCAA GGCACAAAAG GTTCAGCTAC AGCACAGAAT GAAACAAGAA GCAGAACAGT TTCGACAGTG GAAAGCCTCC CGGGAGAAGG AACTTTTGCA GTTACGGAAA GAAGGGAGAA AGAGTGAGTA TGAAAGGCAT AAGCTGCAAG CTTTAAATCA GCGCCAGAAA ATGGTTCTTC AGAGGAAGAC AGAAGAGGCT GCAATGGCTA CTAAAAGGTT GAAAGAGTTG TTAGAAGCTC GGAAATCTTC TCCTCGTGAA CAGTCAGCTG GTACAAATGG CTTTGGAACA AATGGTCAGA CCAATGAGAA GTCGCTGCAG CGTTGGCTTG ATCATGAATT GGAAGTCATG GTGAATGTGC ATGAAGTACG TCATGAGTAC GAGAAACAAA GCCACGTACG AGCTGCGTTG GCAGAAGAGT TGGCTGTTTT AAGACAAGTA GATGAGTTTG TAGTGAAAGG ATTAAGTCCT CCAAGAGGAA AGAATGGCTT TGCTAGGGCT TCATCATTGT CACCTAATGC AAGGATGGCC CGAATATCTT CACTTGAGAA CATGCTTGGT ATATCTTCTA ATTCTCTAGT AGCGATGGCA TCACAACTTT CTGAGGCAGA AGAACGGGAG CGTGCCTTTA CAAACCGTGG CCGCTGGAAC CAGCTACGAT CAATGGGAGA GGCAAAGAAT TTGCTTCAGT ATATGTTCAA CTCTCTTGCA GAAACAAGGT GCCAATTATG GGAGAAAGAT GTAGAAATAA AAGAAATGAA AGATCAGTTC AAAGAGATTG TTGGCCTTCT GAGGCAGAGT GAGTTGAGAA GGAAAGAAGC AGAGAAGGAG TTAAAATTGA GGGAGCAAGC AGTTGCAACT TCACTAGGAA CCCCACCGAG TTCAGTGAAA CATTTAGCTG AAGACCCGAC ACCTTCTCCA ATGACCGTGC CAGCACAGAA ACAGCTCAAG TTTACCCCAG GGATTGCTAA CGGAAAAGTG AGAGGATCGG CTGCATTTCT TGATACCAAC AAGAAGATGG TACCGATGGG ACAAGTATCG ATGAGAAAAC TATCAGCTGT AGGCAAACAA GGTGGGAAAC TTTGGAGGTG GAAGAGAAGT CATCACCAGT GGATCGTTCA ATTCAAATGG AAGTGGCAAA AGCCATGGAG ACTCTCTGAG TGGATTAGGC ACAGTGACGA AACACTCCTC AAGGCTAAAC CCCGACTTAA GGCTCTGCCT AATAAGATCA TGTGATTAAG GTTCTTACCG TTTTCTGAGA GAATCTTTTA GTGTTCAAGC TCTCTCTGCC TCTGAGTATG AGACTTTTAT GGAAAGGATC ATACAAATGG GTACAGAGAC TAGACTTGCT GCCGTGTTTC ATTTGGGAGG AAAACTCTTA AGGTTTTGTG TGATATTGGA AACTTCGTTA TTAGGCGTGT GCACCGCATT AAGGAAAATC ACCAGGACGA GCGTCGAGCG GCAGGTGCTG CTGATTGCTT GTTGTAGCTA ACAGATAGCT GATGGCTTTT TAGGAGTCAG ATTGTTCTTT TCATGTTGAT AGAATTGACA TCTTATACAT CACTAAAGGA GCTGATGAGG AAATAAACCT CATCCTCAAG TTGCAGATAT TTGTATGAAC AATACCGGTT TTATTTGTTC TTTGGTTTGT TGTAAATGAT TAAATATTTG TTTAGTGTCC ACTTTTGTTC CAGTATCTTA AGATTGAGAC |
| Length | 3590 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 9261924.. 9268292 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G47820.1 |
| Description | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| TAIR curator summary | encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers. |
| Alias | [FRA1][FRAGILE FIBER 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.47214 |
Ahg474980 | Protein kinase superfamily protein |
| 7.07107 |
Ahg491693 | Phospholipid/glycerol acyltransferase family protein |
| 7.34847 |
Ahg889766 | auxin response factor 9 |
| 7.48331 |
Ahg474346 | protein kinase family protein / C-type lectin domain-containing protein |
| 8.83176 |
Ahg494984 | Pectin lyase-like superfamily protein |
| 10.3923 |
Ahg491217 | coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative |
| 11.3578 |
Ahg483691 | WD-40 repeat family protein / beige-related |
| 13.4164 |
Ahg471447 | ARM repeat superfamily protein |
| 13.7477 |
Ahg480231 | cycloartenol synthase 1 |
| 14.1421 |
Ahg480010 | RING/U-box superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|