| Annotation |
|---|
| Description | jgi|Araly1|479868|fgenesh2_kg.3__2569__AT3G23590.1 |
| Sequence |
ATAATTCGTC TCGGGACATT CATCCACACG AGGACTATTC AGTCATTTGC AAACGCGCAC ACAAACGCAC ACGCGTTAAT TTTTTTTTCG CCAAATCAAA TCTGAGAGTT CCTGTATCTT TTAACCGCTC TTCCTCTTCT TCAGAGAGCT TCGTTGATTG AACGGAAAAA ATGGTGGTTC CTGGACGGAG AACCGTCTGG GATTGTGTGA TTGAGCTAAC AAAGATGGCT CAAGAAAACT GTATCGATCC TCGTCTTTGG GCTTCTCAGT TATCATCGAA TTTGAAATTC TTCGCCGTCG AGTTACCGTC GACGGAGCTC GCGGAGGTTA TCGTCTCGTA CATTTGTTGG GATAATAACG TTCCTATTCT TTGGAAGTTT CTGGAAAGAG CTATGGCTTT GAAGCTTGTT TCTCCTCTCG TTGTTCTTGC TCTGCTCTCT CACAGAGTTG TTCCAAGCCG GTGTACGCAA GTAGCGGCTT ATAGAATTTA CTTGGAGCTG CTCAAGAGAA ATATGTTCAC TATTAAAGAT CATATTAGTG GACCTCACTA CCAGAAGGTT ATGATTTCAG TAGCCAACGT TCTTCGTCTT TCAAAGTTAT TTGATTTGGA AACAAGCAAA CCTGGTGTGC TTTTAGTAGA ATTTGTTTTT AAGATGGTGT TACAACTGCT AGATGCAACG TTAAGTGATG AAGGTTTGCT AGAGCTAAGC CAAGACTCGA GCTCCCAGTG GCTAGTTAAG TCTCAAGAAA TGGAAATTGA TGTTCCTGAG AGATATAATG AAAAGACTGG ATCGCTAGAG ATGTTACAGT CTTTGAATAC CATCATGGCT ATCGAGTTGA TTGCGGAGTT CCTCAGAAAT ACTGTGATAT CCAGATTGCT ATACTTGGTA TCTTCCAACA GGGCTTCGAA TTGGCATGAA TTTGTTCAGA AAGTGCAGCT GCTTGGAGAA AATTCATCGG CTTTAAAAAA CTCAAAGGTT CTAAATTCTG GGGATCTATT GCAGTTGATT TCAAGTAGAC GATTTGGGTA TTCTTGTGAC AGCAAAGTAA CTTCATCACG GAAATCTAAT GCAATAGTGG ATTTTGGATC TCTCTCTTCC TTTGCTGGCT TATGCCATGG AGCAAGTCTC TCTTCACTTT GGCTTCCTCT TGATCTAGTA TTTGAAGATG CAATGGATGG ATATCAAGTA AACCCAACTA GTGCAATTGA AATCATTACC GGTCTAGCTA AAACACTTAA AGAAATTAAT GGGAGTACTT GGCATGACAC TTTCTTGGGG CTTTGGATAG CAGCTCTCCG ACTTGTTCAA AGGGAAAGGG ATCCTATTGA GGGACCTATT CCTCGACTGG ACACAAGGCT GTGCATGTCA TTATGTATTG TGCCTCTTGT GGTCGCAAAC CTTATTGAAG AGGGGAAATA CGTATCTGTC ATGGAAAAGC TGCGAAATGA TCTTATTACA AGTTTGCAAG TCCTCGGTGA TTTCCCTGGA TTGCTGGCTC CTTCCAAGTG TGTTGTTTCT GCTGCCAACA AGGCTGCTAC GAAGGCAATC TTGTTTTTGT CTGGTGGCAA TGTTGGAAAG TCGTGTTCTG ATGTCATAAA CATGAAGGAA ATGCCTATCA ACTGCTCTGG AAACATGCGC CACCTGATAG TCGAGGCTTG TATTGCAAGA AACATACTGG ATACGTCGGC CTATTCGTGG TCTGGCTATG TCAATGGCCG AATCAACCAA ATACCTCAGA GTCTGCCGAA TGAAGTACCC TGCTGGTCGT CATTTGTGAA AGGGGCCCAA CTAAATGCTG CAATGGTGAA TGCATTAGTT TCAGTTCCTG CTTCAAGCTT AGCAGAGCTC GAGAAACTAT ATGAGGTTGC AGTCAAAGGA TCGGATGACG AGAAGATATC TGCTGCTACA GTTCTTTGTG GGGCATCTCT CACACGGGGT TGGAACATAC AGGAACACAC TGTTGAGTTT CTTACAAGAT TACTATCCCC ACCCGTTCCA GCAGATTATT CCAGGGCTGA AAATCATTTG ATTGGTTATG CCTGCATGCT GAATGTTGTT ATTGTTGGGA TAGGATCTGT TGACAGCATT CAGATTTTCT CTTTACATGG CATGGTTCCG CAACTTGCTT GCTCACTAAT GCCAATCTGT GAAGAGTTTG GATCTTACTC CCCGAGTGTA TCATGGACTC TTCCTTCCGG AGAACAAGTA TCAGCCTATT CTGTTTTCTC AAATGCATTC ACTCTTCTTT TAAAGCTTTG GAGATTCAAT CATCCTCCTA TTGAGCATGG TGTAGGAGAT GTTCCCACAG TTGGTTCCCA ACTCACTCCT GAACATCTTC TTTCAGTGCG TAATTCTTAT CTTGTTTCGT CGGAGACCCT TGATAGAGAC CGAAACAGAA AGAGACTTTC AGAAGTTGCA AGGGCAGCAT CTTGCCAGCC CGTGTTTGTT GACTCGTTCC CCAAGCTAAA AATCTGGTAT AGGCAGCACC AAAGATGCAT AGCTGCCACA TTATCTGGAC TTACACATGG ATCTCCCATT CATCAGACAG TTGAAGCACT TCTCAACATG ACGTTCGGTA AGGTCAGAGG CAGTCAGACT TTAAATCCAG TAAATTCGGG CACAAGCAGT TCATCAGGAG CTGCAAGTGA AGATAGCAAT ACAAGACCTG AGTTTCCTGC TTGGGATATC CTCAAAGCCG TTCCATATGT TGTAGATGCT GCTTTAACTG CTTGTACTCA TGGAAGGCTT TCGCCTCGTC AGTTAGCTAC AGGGCTGAAA GACTTAGCAG ATTTTCTCCC GGCATCATTA GCAACGATAG TAAGCTATTT CTCAGCTGAG GTGAGTAGAG GAGTTTGGAA GCCAGTATTC ATGAACGGTG TGGATTGGCC AAGTCCAGCT ACAAATCTAT CCTCTGTTGA GGAATATATA ACGAAAATTC TTGCAACAAC AGGCGTCGAT ATCCCTAGCC TTGCTCCAGG AGGGAGTTCA CCGGCAACAC TTCCTTTACC TTTAGCCGCC TTTGTAAGTC TAACCATTAC TTACAAAATT GACAAAGCCT CAGAGCGGTT TCTCAACCTG GCTGGCCCAG CTCTTGAGTG CTTGGCTGCA GGCTGCCCTT GGCCTTGCAT GCCCATTGTA GCTTCATTAT GGACCCAAAA GGCGAAACGT TGGTTTGACT TCCTTGTTTT CTCTGCCTCT CGCACCGTCT TCCTTCACAA CCAAGACGCT GTGATTCAGC TCCTCAGAAA CTGCTTCAGT GCCACTCTCG GTTTGAATGC TGCCCCCATG TCAAATGATG GTGGCGTTGG AGCTCTTCTT GGCCATGGAT TTGGCTCTCA TTTCTATGGC GGGATCTCTC CTGTAGCACC AGGGATTCTT TATCTTCGTA TGTATCGTGC TCTCAGAGAT ACTGTCTCTG TATCGGAAGA AATTCTCTCT CTGCTGATAC ATTCGGTGGA GGATATAGCC CAGAACAGGC TCTCAAAGGA GAAGCTGGAA AGGCTGAAGA CAGTGAAGAA CGGAACAAGA TACGGCCAAA GTTCTCTAGC AACAGCAATG ACTCAAGTCA AGCTTGCTGC TTCGCTTAGT GCCTCGTTGG TATGGCTAAC CGGTGGCTTA GGTGTGGTCC ACCTACTGAT CAAAGAAACC ATCCCGTCTT GGTTTCTATC AACTGACAAA TCAGACCGAG AACAAAGACC ATCAGATCTA GTTGCAGAGC TAAGAGGTCA TGCCCTTGCC TACTTTGTAG TCCTATGTGG AGCATTTGCT TGGGGGGTGG ACTCAAGATC ATCTGCATCA AAACGCCGCC GCCAAGCAAT CTTGGGAAGC CACTTGGAGT TCATCGCGAG TGTCTTAGAC GGGAAAATAT CAGTGGGATG CGAAACAGCA ACTTGGCGGA CATATATTTC CGGTTTGGTG AGTCTAATGG TGAGCTGTTT GCCTCTCTGG GTGACAGAGA TCGATACAGA AGTGTTAAAG AGTGTAAGCA GTGGACTAAG AAAATGGGGA AAAGAAGAGC TAGCGATTGT ATTACTCTCC TTGGGAGGTC TCAGAACAAT GGACTACGCA GCTGATTTCA TCATTCATTT GCGTTCATAG CTTCTTAAAA AGTTTTGATC TCTCCAGTTT TTTTCAGATA GTTGCTTGAT AGATGTGTTT CTTGTAGTGA ATTTGCTTCC TTGTTGTGAC TTGTGTTCTC TAGCTCCAGT GTTGTGTGAT |
| Length | 4220 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 10165007.. 10171247 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G23590.1 |
| Description | REF4-related 1 |
| TAIR curator summary | |
| Alias | [MED33A][RFR1][REF4-related 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 16.1245 |
Ahg476140 | |
| 17.9722 |
Ahg489620 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 19.3132 |
Ahg950909 | Major facilitator superfamily protein |
| 26.7208 |
Ahg908608 | TRICHOME BIREFRINGENCE-LIKE 27 |
| 29.1548 |
Ahg496503 | MA3 domain-containing protein |
| 40.8167 |
Ahg922142 | FAD-binding Berberine family protein |
| 44.5982 |
Ahg914753 | Leucine-rich repeat transmembrane protein kinase |
| 46.2169 |
Ahg489205 | ferredoxin/thioredoxin reductase subunit A (variable subunit) 1 |
| 47.6235 |
Ahg474909 | AMP-dependent synthetase and ligase family protein |
| 51.7687 |
Ahg917381 | beta-galactosidase 4 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|