Detail


ID : Ahg480224

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480224|fgenesh2_kg.3__2925__AT2G06530.1
Sequence
ATTCCTTTAC GCGTTTCGCA TCGAAAGGAA GCTTCGTCTC TTGTATATTT TTTCCAGTCC GATCAAAGGT TTTGCTAATT CGTCGGCTTA ATTTCGTTCA AGCTTCTGCA AATTCCCAGA TTTGGTATTG AAGAATCATG ATGAATTCAA TCTTCGGAAA GCGAAAAACT CCCGCAGAAC TTCTGCGGGA AAACAAGCGG ATGCTCGATA AGTCTATCAG GGAGATAGAG AGGGAGAGAC AAGGCCTTCA AACACAAGAA AAGAAACTCA TTAACGAGAT TAAAAAGACC GCAAAGCAGG GCCAGATGGG AGCCGTTAAA GTGATGGCAA AGGATCTTAT CAGAACGCGG CACCAGATTG AGAAGTTTTA CAAGCTTAAA TCCCAACTTC AAGGTGTATC TCTCAGGATC CAGACTCTGA AATCTACACA AGCAATGGGT GAGGCGATGA AAGGTGTGAC TAAAGCAATG GGGCAAATGA ACAGGCAGAT GAACCTTCCA TCTCTGCAGA AAATCATGCA AGAATTTGAG AGGCAGAACG AGAAAATGGA GATGGTGTCT GAGGTGATGG GAGATGCTAT TGATGATGCT TTGGAAGGAG ATGAGGAAGA AGAAGAGACT GAAGATCTTG TTAGCCAAGT CCTTGACGAG ATTGGTATCG ACATCAACCA AGAGCTGGTG AATGCTCCAT CTGGTGCGGT GGCAGTACCA GCCGCAAAGA ACAAGGTGGT GCAAGCTGAA GCGACCGGAG CTGAGGATAG CGGAGGTATA GATAGTGACC TTCAAGCAAG GTTGGACAAC CTTCGAAAAA TGTGAAGCCT TTCCGGTTTC TGTATCATAT TATTACTGAG GCTGATCACT TTTCAACTTC AAAGGCAAAT GTTGCAAACG ATATGTTAAC GTTTTGGGGG TGGGTTTGTA ATAATTTCAT AATTTGAGCC CTAAATTATA AACCGATTAT TGTTCAAACA CCTTGTATAT AA
Length982
Protein Sequence
Protein Residue
Map Locationscaffold_3: 13768742.. 13770941
Download Sequence
A.thaliana
AGI-codeAT2G06530.1
DescriptionSNF7 family protein
TAIR curator summary
Alias[VPS2.1]
Gene coexpression
MR
MR Locus Description
2 Ahg934359 PLAC8 family protein
8.77496 Ahg470287 kinase interacting (KIP1-like) family protein
10.7703 Ahg492720 oxidoreductase, zinc-binding dehydrogenase family protein
12.49 Ahg485652 A20/AN1-like zinc finger family protein
15.2315 Ahg472892
15.3948 Ahg495666 RPM1-interacting protein 4 (RIN4) family protein
17.3205 Ahg484985 RAB GTPase homolog 8A
22.4499 Ahg473360 proline-rich family protein
22.8035 Ahg312180 eukaryotic translation initiation factor-related
23.622 Ahg495999 HSP20-like chaperones superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression