| Annotation |
|---|
| Description | jgi|Araly1|480309|fgenesh2_kg.3__3010__AT2G13540.1 |
| Sequence |
AAGATGAGCA ATTGGAAAAC TCTTCTCCTT CGCATCGGCG AAAAGGGTCC TGAGTACGGC ACTTCCTCCG ACTACAAAGA CCATATCGAG ACTTGTTTCG GTGTTATTCG CAGAGAAATC GAGCGTTCTG GAGATCAAGT TTTGCCTTTT ATACTGCAAT GTGCTGAACA ATTGCCTCAT AAGATTCCTT TGTATGGGAC TTTGATTGGT TTGTTGAACT TGGAGAATGA AGATTTTGTC CGGAAGCTAG TAGAAAGTGT CCACGCTGAT TTCCAGGTCG CTTTAGATTC TGGCAACTGC AACAGTATCC GTATATTGCT TCGCTTTATG ACGTCCCTGT TGTGCAGTAA GGTTATTCAA CCTGCTTCTT TGATTGTCGT GTTCGAAACA TTGTTATCAT CTGCTGCCAC TACTGTGGAC GAAGAGAAAG GAAATACATC ATGGCAGCCA CAAGCTGACT TTTACGTCAT ATGCATCTTG TCCAGCCTCC CGTGGGGAGG ATCAGAACTC GCTGAGCAAG TTCCTGATGA GATTGAAAGA GTGTTAGTTG GGATACAAGC TTATTTGAGC ATCCGAAAGA ATTCTTCCAC ATCTGGGTTA AACTTTTTTC ACAACGGAGA ATTTGAAAGC AGCCTTGCAG AGAAGGATTT CGTGGAGGAT CTATTGGATC GAATACAGTC TCTGGCTTCC AATGGATGGA AACTTGATAG TGTTCCTAGG CCTCATCTCT CTTTCGAAGC TCAACTCGTT GCTGGAAAGT TTCATGAGCT AGGCCCCATT AAATGTATGG AACAACCGAG TCCACCTTCT GATCATTCGA GAGCATACAG TGGCAAGCAA AAGCATGATG CTTTGACGAG ATATCCCCAG AGAATTCGTA GGTTGAATAT CTTTCCAGCT AATAAAATGG AGGATGTACA ACCTATCGAT CGCTTTGTCG TGGAGGAGTA TTTGCTGGAT GTGCTCTTCT ATTTAAATGG ATGTCGGAAG GAGTGTGCGT CCTACATGGC TAATCTTCCT GTTCCTTTTC GGTATGAGTA TCTTATGGCA GAGACACTAT TTTCTCAGAT ACTGCTGCTA CCACAACCAC CATTCAAGAC TCTTTATTAT ACACTCGTGA TTATGGATCT TTGTAAGGCT CTTCCGGGTG CCTTTCCTGC TGTTGTTGCT GGTGCTGTTC GTGCACTATT TGAGAAAATT TCCGACTTAG ACATGGAATC CAGGACACGC CTTATCCTCT GGTTTTCTCA CCACTTGTCC AACTTCCAAT TCATCTGGCC GTGGGAAGAG TGGGCTTATG TGTTGGACCT TCCCAAGTGG GCCCCTAAGC GTGTATTTGT TCAGGAGATT TTGCAAAGAG AAGTACGCTT GTCTTACTGG GATAAAATTA AGCAGAGCAT TGAGAATGCG AGCGCCCTAG AAGAATTGCT TCCTCCAAAG GCTGGTCCGA ATTTTATGTA TTCCTTGGAA GAGGGTAAAG AGAAAACAGA AGAACAGCAA TTGTCAGCCG AATTGAGCAG GAAGGTTAAG GAAAAACAAA CTGCACGTGA CATGATGGTG TGGATTGAGG AAACGATATA TCCAGTTCAT GGTTTTGAAG TCACTCTTAC AATAGTTGTA CAGACCTTAC TTGACATCGG ATCAAAAAGT TTCACTCATT TGGTCACTGT CCTGGAGCGA TATGGCCAAG TATTTTCAAA ACTTTGTCCT GATAATGATA AGCAGGTGAT GCTATTATCT CAAGTGAGTA CATACTGGAA AAACAATGTA CAAATGACGG CGGTGGCAAT CGATAGGATG ATGGGTTATA GACTAGTATC TAATCAGGCA ATTGTTAGAT GGGTGTTCTC TCCAGAAAAT GTTGATCAAT TCCATGTGTC TGATCAGCCA TGGGAGATAC TTGGCAATGC TCTTAACAAG ACTTATAACC GTATCTCTGA TTTGAGGAAA GATATATCAA ACATTACGAA AAATGTTTTG GTTGCTGAGA AAGCTTCAGC CAATGCACGA GTAGAGTTGG AGGCTGCTGA GAGCAAACTT TCCCTAGTGG AGGGTGAGCC CGTTCTTGGT GAGAATCCAG CGAAGATGAA GCGTTTAAAA TCAACAGTGG AGAAGACAGG AGAAGCGGAG TTATCTCTTC GTGAGTCCCT AGAGGCAAAA GAGGCTCTTC TTAACAGAGC TCTCTCTGAG ACCGAGGTTC TACTGCTCTT GCTGTTCCAA AGTTTCTTAG GTGTATTGAA GGAACGTCTC CCAGATCCAA CAAAAGTGAT ATCAGTGCAG GATCTAAAAT CTATAGGAGC GGAAGATGAC AAGCCATCTG CGATGGACGT GGACAGTGAG AATGGAAACC CAAAGAAGAG TTGTGAAGTC GGTGAGAGAG AACAGTGGTG CTTATCAACA CTTGGCTATC TCACGGCATT TACAAGGCAA TATGCGAGCG AGATATGGCC TCACATGGAG AAGTTGGAGT CGGAGGTGTT CTCGGGTGAA GATGTGCATC CTCTCTTTCT TCAAGCCATA TCTTCTGCGC TTCAATTCCC ATTACAATAA TCCTCTTTCA ATCTCAAACT GGTCTCTTTT GTTTTTGTTA TCAGATTCTG ATTTTGACAT TCAAGTTTAT TAGGAAATCG AAAAGAATCA TAAAACAAGA GTTTAAACTT TAAACAGCAG TATTGTTTCT G |
| Length | 2681 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 17247169.. 17253546 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G13540.1 |
| Description | ARM repeat superfamily protein |
| TAIR curator summary | Encodes a nuclear cap-binding protein that forms a heterodimeric complex with CBP20 and is involved in ABA signaling and flowering. Mutants are early flowering and exhibit hypersensitive response to ABA in germination inhibition.Loss of ABH1 function results in abnormal processing of mRNAs for several important floral regulators (FLC, CO, FLM). Analysis of loss of function mutations suggests a role in pri-miRNA processing and mRNA splicing. Note that two different mutant alleles were given the same name abh1-7 (Kuhn et al 2007; Kim et al 2008). To avoid confusion, abh1-7 described in Kim et al (2008) has been renamed abh1-107 (other names: ensalada-1, ens-1). |
| Alias | [ABH1][ATCBP80][CBP80][ENS][ABA HYPERSENSITIVE 1][CAP-BINDING PROTEIN 80][ENSALADA] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.245 |
Ahg496924 | succinate dehydrogenase 1-1 |
| 6.32456 |
Ahg477721 | RNA-binding KH domain-containing protein |
| 6.48074 |
Ahg320449 | regulatory particle non-ATPase 13 |
| 7.34847 |
Ahg484426 | eukaryotic release factor 1-3 |
| 11.6189 |
Ahg350108 | |
| 12.3288 |
Ahg903021 | auxin transport protein (BIG) |
| 12.4097 |
Ahg479619 | translocation protein-related |
| 12.9615 |
Ahg932042 | ER lumen protein retaining receptor family protein |
| 13.4164 |
Ahg495780 | CwfJ-like family protein / zinc finger (CCCH-type) family protein |
| 14.0712 |
Ahg478363 | Cyclin-like family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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