| Annotation |
|---|
| Description | jgi|Araly1|497366|fgenesh2_kg.267__3__AT3G07360.1 |
| Sequence |
CTTCTTCTCT CTTCCTCATA TAATATTTAT TACTCTCTCT TTCACAAACA CAGAAACAAA ATAAATAAAA AATATAATTA ATGTGAGAAA ATCAATTCAA AAATTTCGAC ATACGTAATC TGAGAGGAAG GGTTGGGTGA ATACCGGCGG TGGATCCGAC GGCGATGGCG AAGACCGGTG TTTTCGATTC GGATCCGACG GCGATTGCGA AAGCCAAAGA ACTGAAGCGT GAGATGAAGA AGCTGCTGAT TAAGATCGAA GATGAAGATG ACTTTGGGGT TCAGACAATT GATCAGTTAC AAGAGGCTTT GTCTGCGTTG AGAGAAGCGA CGATGAGGAA GATGGCGAAA TCGTCTTCAC TGGAGATGCT CGAGACTGTG TCTTGTCCTG AGGAGTTTCG TTGTCCTCTC TCTAATGAGC TTATGAGGGA TCCCGTCGTT TTGGCTTCTG GTCAGACATA CGACAAGTTA TTTATCCAGA AATGGTTGAG CTCAGGCAAC AGAACATGTC CCAAGACTCA GCAAGTTCTG CCTCACACGG CTTTAACACC TAATCTCTTA ATCCGTGAAA TGATCTCAAG ATGGTGCAAG AAGATCGGGC TAGAGACGAA GAACCAATAT CATCCCAACC TTGTAAATGA AGAGGAAGCT GTCACAAGAT CAGATCGTGA GATTTTCAAT TCCTTGCTCT GTAAAGTCTC TTCTTCGAAC CTTCAAGATC AAAATTCAGC TGCCAAGGAG CTAAGACTTC TGACCAAGAA AGGCACTGAG TTCCGAGCTC TTTTTGGTGA ATCTCCGGAT GAAATCACCC GGTTGGTTAA TCCCTTGTTA CACGGGTCAA ACCCAGATGA GAAGCTTCAA GAAGATGTGG TCACAACATT GTTGAACATA TCCATACATG ATGACAGCAA CAAGAAGCTC GTCTGCGAAA ATCCTTGTGT GATTCCTCTC CTTATCGATG CATTGAGGCG TGGAACGGTA GCCACGAGAA GCAATGCAGC TGCGGCGATC TTTACTCTGT CGGCACTCGA TTCGAACAAA GTACTTATAG GGAAGTCCGG AATCCTGAAA CCGCTTATTG ATCTCCTAGA AGAAGGGAAT CCGTTAGCTA TCAAAGACGT AGCTGCAGCG ATCTTCACTC TTTGTATAGC TCATGAAAAC AGGAGTAGAG CTGTGAGAGA CGGAGCTGTT AGGGTTTTAG GTAAGAAAAT CTCAAATGGG TTGTACGTCG ATGAGCTTTT AGCTATATTA GCAATGCTTG TTACTCACTG GAAGGCTGTG GAGGAATTGG GTGAGCTCGG TGGGGTTTCT TGGTTGCTGA AGATAACTCG AGAGAGCGAG TGCAAGCGAA ACAAAGAGAA TGCGATAGTG ATACTGCATA CTATATGTTT CAGCGACAGG ACAAAGTGGA AGGAGATCAA AGAAGAGGAG AATGCTCATG GAACGATAAC AAAGCTTTCG CGTGAAGGAA CTTCAAGGGC ACAGAGGAAA GCAAATGGGA TCTTGGACAG ACTGAGAAAA GCTATGAATC TCACTCATAC AGCCTGAGAG AAGCCTTGGA TTCGGCAATG TAAATTATCT AAAATCCTGT TCTAACTTAC TTTATTTGGC TTTAAGAATT TTTGTAAATT ATTCATATCT TTAGGATCTG AATGATTTTA TGGTTTTCGT ATATGAGATG TAAGTAGAAA TCTGTGTGGA TAGGTTTTAA ATCAATCAAT AAAAATCAAC GTTGGTCGCT TTATTCAGCT GTGAACGCCT TGGTC |
| Length | 1765 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_267: 5898.. 8005 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G07360.1 |
| Description | plant U-box 9 |
| TAIR curator summary | Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. |
| Alias | [ATPUB9][PUB9][ARABIDOPSIS THALIANA PLANT U-BOX 9][plant U-box 9] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.16228 |
Ahg902166 | guanylate kinase 1 |
| 4 |
Ahg480456 | Protein of unknown function (DUF502) |
| 4.89898 |
Ahg492220 | phosphatidylserine decarboxylase 3 |
| 15.1987 |
Ahg949102 | E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein |
| 16 |
Ahg336541 | HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 |
| 22.1811 |
Ahg934280 | demeter-like 1 |
| 23.6643 |
Ahg478844 | phosphatidylinositol-4-phosphate 5-kinase family protein |
| 24.1661 |
Ahg496527 | Leucine-rich repeat protein kinase family protein |
| 27.9285 |
Ahg489315 | Transducin/WD40 repeat-like superfamily protein |
| 32.187 |
Ahg907740 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|