Detail



ID : Ahg480602

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480602|fgenesh2_kg.3__3303__AT2G17200.1
Sequence
TCTACCGAAC CGACTTAGAG CTTTTGTCTA AATCTTGATT GAATTTTTCT AGGGTTAGGG CTCCTGATCG ATTTCGCGAG CTTAGGATCC GAAATTAGAA TGGGTGGAGA GGGAGGAGAT TCGAGTCAGC CGCAGACTGG AGAAGGAGAA GCTGTCTCCG TGAACATCAG GTGCTCAAAT GGCACGAAAT TTAGTGTGAA GACGAGCCTT GATTCGACGG TGGAGTCTTT CAAAGAGTTG GTGGCTCAGA GCAGCGATGT TCCAGCCAAT CAGCAACGCT TGATTTATAA GGGTCGGATC CTCAAGGACG ATCAAACTCT CCTCAGCTAT GGTTTGCAGG CTGATCACAC AATTCATATG GTTCGAGGCT CTGCACCTTC TTCAGCACCA CCTTCTGCTC CGGCTGCGAA TGCTGGAAAC CAAACCACTG CACCTAGTGT TACTCGAGGG GTTGGTTCAG ATAATAGCTC GAATCTAGGA GGAGCGGGTC CTGGGGAATC TTTGTTCCCT GGGCTTGGAT TTAATCCTTT GGGTGGTGGA AATGCTATGG CTGGGTTATT TGGAGCTGGT CTTCCGGATC TTGAGCAGGC ACAGCAACAA CTAGCTCAAA ACCCTAATAT GATTAGAGAT ATGATGAATA CACCAGCCAT CCAGAATCTT ATGAATAACC CAGAATTTAT GAGGAGTATG ATTATGAGTA ACCCACAAAT GCGTGAGCTT GTAGATCGCA ATCCTGAGCT TGGCCATGTG CTCAATGACC CAAGCATCCT TCGGCAAACT TTAGAGGCAG CGAGAAACCC AGAGCTTATG CGTGAAATGA TGCGGAATAC CGATAGGGCT ATGAGTAATA TTGAGTCTAT GCCTGAGGGA TTTAACATGC TTAGGCGTAT GTATGAAAAT GTCCAGGAAC CTTTCTTGAA TGCTACTACT ATGTCAGGGA ATGCTGGAAA CAATACGAGC TCCAATCCGT TTGCTGCTCT CCTGGGAAAC CAGGGGGTTA CTACTCAAGG AAGTGTTGCT TCTAATAACT CTTCCACAAC AAATACTGGA ACGGGGACTA TTCCGAATGC AAATCCACTT CCTAATCCTT GGGGTGCTAC GGGTGGCCAG ACAACTGTCC CTGGAAGGAC CGATGCTGCT GGGGATGCGA GAAGCCCTGG CCTTGGCGGC CTTGGGGGTC TTGGAGGCCT CGGTGGACTT GGTATGCTTG GAGCGGATTC ACCTCTTGGT GCCACTCCAG ATGCTTCTCA ATTGAGCCAG TTATTGCAAA ACCCAGCCAT GTCGCAGATG ATGCAAAGCG TATTTTCCAA TCCACAATAC ATGAATCAGC TTATGAATCT TAACCCACAA CTCCGAAGTA TGCTAGATTC GAATCCTCAG TTGAGGGAAA TGATGCAGAA TCCAGATTTC CTTCGTCAGT TTAGTTCTCC GGAGATGATG CAGCAAATGA TGACTCTACA GCAATCACTT TTATCTCAGA ATAGAAACGC AGCCAGCCAG GATGCGGGGC AAACTGGTGC TGCCACAGGG ACGAACAATA ACGGGGGGCT GGATTTATTA ATGAATATGT TTGGCAGTCT TGGTGCTGGC GGCCTGAGTG GCACAAACCA ACCCAATGTT CCTCCCGAGG AGCGCTATGC TACTCAGTTG CAACAGTTAC AGGAAATGGG ATTCTACGAC AGAGCAGAGA ACATAAGAGC ATTGCTTGCA ACCAATGGTA ACGTTAATGC TGCTGTAGAA CGACTCTTGG GGAGTATCGG ACAGTAGCAT ACAGGTTGGT GAACTGAGGT TTCTCCATCT GGCTTCTCAG TTATAGAATA AACAGCTTGA ATGTGTGTTT TCAGTAATGA ATATATTCAT GGAATTCTTA AAATTTAATA TATGATAGGA TCGTGAACTT TGTGGATAGA AAAGCCGCAT CAATACGGTA TTTGTTTTCA GTGGTCA 
Length1947
Protein Sequence
Protein Residue
Map Locationscaffold_3: 20666531.. 20669898
Download Sequence
A.thaliana
AGI-codeAT2G17200.1
Descriptionubiquitin family protein
TAIR curator summary
Alias[DSK2][DSK2b]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg484508 global transcription factor group E8
8.30662 Ahg491088 NAC transcription factor-like 9
9.53939 Ahg484196 Galactose oxidase/kelch repeat superfamily protein
11.3137 Ahg472928 histidine kinase 3
11.4018 Ahg912744 MEI2-like protein 5
12.6491 Ahg473061 homeobox-1
14.0357 Ahg906204 myosin heavy chain-related
15 Ahg482251 peroxisomal 3-ketoacyl-CoA thiolase 3
16.7332 Ahg491857 Enoyl-CoA hydratase/isomerase family
19.0263 Ahg933591 helicase in vascular tissue and tapetum
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression