| Annotation |
|---|
| Description | jgi|Araly1|473061|fgenesh2_kg.1__3015__AT1G28420.1 |
| Sequence |
TTTGGGATCA GGGTTTGTTT GTTGAAAGCC CTAGTTTTTG TTTTTGTGTT CTTTGATTCT TGCGGCCGTT TCTGGGTTTC TTCTTCTTCT TCTCTTCCAT GGAGATGGGT TCTGATGGAG ATGAAGATCA GATCAGGAGC GTTGGTGATG TTGGTGGTAA TCATCTTAAT AAGAAGAAGA AGATTGATAA TTCCTCCTCC AAGGATGGTG GTCGTGTTAA GCCTAAGCGT CAGATGAAAA CTCCGTTTCA GCTTGAAACC TTGGAGAAAG TTTATTCAGA GGAGACGTAT CCTTCGGAGG CCACGAGGGC TGACTTGTCT GAGAAATTGG ATTTGTCAGA TCGACAATTA CAGATGTGGT TTTGCCATAG ACGCTTAAAG GACAAGAAGG ATGGTCAGTC CAAGAAACCC GCGAAATCAG CGGTTCAATC GTCTGCTTTA GCGTCTTCCG TTCACGAGTT ACCGCCTGCT GGATCGGTAC CTGAGCAAGA TTCCAGATCT GATTCGGGCT CTGAGTCAGG TTGCAGTCCT TATTCCAACT CAAGGAGGAA TTTTGCTAGT GGTAGTAGTA GTTCTCGAGC TGAATTGGAT GAATACGAGA CAATGGGAAA GGCGAGTTAT GAGTCACGGT TGTCGACAAT GGTGCGTAGA GCTATTGTCT GCATTGAGGC ACAGTTAGGT GAGCCATTGA GAGATGATGG ACCTATTCTT GGTATGGAGT TTGATCCTTT GCCTCCTGGT GCATTCGGAA CACCTATAGC GATGCAGAAA CACCTAGTTC ATCCGTATGA GAGCAATGTG TATGAGCGAT ATGATGCCCG ACCTCGAAGA TCTCATGCTG CTGCCCGTTC TTTCCATGAG CAACAATCTC TGGATGATTC GTCTTCTTTT ACACCTGAGA TGTATGGACG ATACTCTGAA AATCATGCAC GTGGTATGGA CTATGAAATT GCACGTTCTA GGAGTTCATC ATTTATGCAC GCGAATGGGC CTTTACCAAG GTCCTATGTT ACCCCTGGAC ATGTGTCTCG TAACTGTTCT ACATCTCAAC AAGACATGCC AATCCCCATT GAATCAGCTC ATCGTGGTGA TAGATTCCTG CTGGAAAAGG ATTCATCAGT CCTCGGTACA GAAGATCCAT ATTTGTTGCC TGATGGGGTG CGTAAGAGTA ATGATGTGCA TCGGAAGGGA AAGATTAACG ATGATAGACT TGGAAGAGGA AGTGAAATCC GAGAGAATCA TGGACCAAAA GATCTTGAGA AGCTAGAAAT TCAGAGGAAA AAAAATGAAG AACGCATGAG AAAAGAAATG GAAAAGAACG AACGTGAGAG GCGTAAGGAA GAAGAGAGGT TGATGCGTGA AAGAATAAAA GAAGAGGAGA GGTTACAGCG TGAGCAGCGT CGTGAAATAG AAAGAAGAGA AAAGTTCTTA CAGAGAGAAA ATGAAAGGGC GGAGAAAAAG AAGCAAAAAG ACGAGATTCG CCGAGAGAAA GACGCTATTA GACGCAAGCT TGCCATTGAG AAGGCAACTG CACGTAGAAT TGCCAAGGAG TCTATGGATC TTATTGAAGA TGAGCAGCTA GAACTGATGG AATTGGCTGC TATTAGCAAA GGATTGCCCT CAGTATTACA GCTTGATCAC GACACATTGC AAAATCTTGA AGTGTATAGA GATTCTCTGA GCACATTTCC ACCAAAGTCT TTGCAACTAA AAATGCCGTT TGCCATTTCT CCATGGAAAG ATTCTGATGA AACTGTTGGA AACCTTCTAA TGGTTTGGAG ATTCCTGATA TCATTTTCTG ATGTTCTTGA CCTATGGCCT TTTACACTGG ATGAGTTTAT TCAGGCTTTT CATGACTATG ACTCAAGGTT GTTGGGGGAG ATACATGTTA CTCTTCTGAG ATCAATAATA CGAGATATCG AAGATGTTGC TAGGACACCC TTTAGTGGAA TTGGAAATAA CCAATATACT ACAGCCAATC CTGAGGGTGG ACATCCGCAA ATAGTTGAAG GGGCTTATGC ATGGGGCTTT GACATTCGTA GCTGGAAAAA GCATTTGAAC CCACTAACAT GGCCTGAAAT ACTGCGACAA TTGGCACTCT CTGCTGGATT TGGGCCTAGG CTGAAGAAAA AACATTCCCG ATTGACCAAT ACTGGTGATA AGGATGAGGC TAAAGGTTGT GAAGATATCA TTTCTACTAT CCGAAATGGT TCAGCAGCTG AAAGTGCTTT TGCATCGATG CGGGAGAAAG GGTTACTCGC TCCTCGCAAG TCAAGGCACC GGTTGACACC TGGAACCGTC AAATTCGCAG CCTTTCATGT ACTATCTCTT GAGGGAAGCA AGGGACTGAC AGTATTAGAA CTTGCTGACA AGATTCAGAA ATCTGGACTT CGGGACTTGA CAACAAGCAA GACACCAGAG GCTTCTATTT CTGTTGCATT GACAAGAGAT GTGAAACTCT TCGAAAGAAT AGCTCCTTCG ACTTATTGTG TACGAGCTCC TTATGTGAAG GATCCTGCGG ATGGAGAGGC AATACTCGCA GATGCCAGGA AGAAGATAAG GGCATTTGAA AATGGATTTA CAGGTCCAGA AGATGTGAAT GATCTTGAAA GGGATGAAGA ATTTGAAATT GATATTGATG AGGATCCTGA GGTTGATGAT TTAGCTACTC TGGCAAGTGC ATCAAAAAGT GCCGTTCTAG GTGAAGCGAA TGTTTTGTCA GGAAAGGGGG GAAATACTAT GTTCTGTGAT GTTAAAGCTG ATGTAAAGAG TGAGCCTGAG AAGGAGTTTC CATCTCCTCC TCCAAGCAGT ATGAAGAGCA TTGTTCCACA ACATAGTGAG CGGTTTAAAG ATACAGTGGT TGGCTGCGTG GATACCGTGG TTGATGAAAG CAACCAGGGC CAATCATGGA TTCAAGGTCT TACGGAAGGG GATTACTGTC ATCTAAGTGT TGAAGAGCGC CTTAATGCCC TTGTTGCTTT AGTCGGCATT GCCAATGAAG GAAACTCCAT CAGAGCTGGT CTTGAGGATC GTATGGAAGC AGCAAATTCT CTTAAAAAGC AAATGTGGGC TGAAGCACAG TTAGATAACA GCTGTATGAG AGATGTACTT AAGCTTGATT TTCAAAACCT AGCAAGCAGC AAAACCGAAT CAACGATGGG TCTACCAATC ATCCAAAGCT CTACTCGTGA GAGGGATAGT TTCGATAGAG ACCCTTCTCA ACTTCTAGAT GAAACAAAGC CCCTGGATGA TCTTTCGAAC AATCTTCATA AATCATCTGC TGAGAGAGCA CTTATTAATC AGGATGCCAA TATAAGTCAA GAAAATTGTT CTTCCCAACT TGGATATGCT TCAAAGAGAT CACGCTCACA ATTAAAATCA TATATAGGCC ACAAAGCAGA AGAGGTGTAT CCATACCGAT CTTTGCCGCT TGGACAAGAT CGGCGCCACA ATCGTTACTG GCATTTTGCT GTATCAGTGT CTAAGAGTGA TCCTTGCTCG GGGCTCTTAT TTGTTGAGCT ACATGATGGC AAGTGGCTCC TCATTGATTC AGAAGAGGCT TTTGATATTC TGGTTGCATC ATTGGATATG CGCGGGATCA GAGAGTCTCA TTTACGCATA ATGCTGCAGA AGATCGAGGG ATCATTCAAA GAGAATGCTT GTAAAAATAT AAAGCTAGAT AGAAACCCTT TCTTGAAGGA AAAGAGTATT GTGAATCATT CTCCTACAGA TTCTGTGAGC CCGTCCAGTG CTATATCAGG GTCAAACTCT GATTCAATGG AAACTTCAAC TTCAATTAGA GTTGAGTTAG GTAGAAACGA CACCGAGAAC AAGAATTTAT CAAAACGATT CCATGATTTC CAGAGATGGA TGTGGACCGA GACGTACAGT TCACTACCTT CTTGTGCTAG AAAATATGGG AAGAAGAGAT CTGAACTGTT AGCAACATGT GATGCGTGTG TTGCTTCTTA TTTGTCTGAG TATACCCACT GCACTTCTTG TCACCAGAGA CTGGACGTGG TTGATAGTTC AGAGATATTA GATTCAGGTT TGACTGTGTC TCCTCTTCCT TTTGGAGTCA GGTTGCTCAA ACCACTACTT GTTTTTCTCG AGGCATCTGT TCCAGATGAA GCTCTTGAAT CATTTTGGAC GGAGGACAAA AGAAAAATTT GGGGGTTTAG GTTGAATGCT TCATCATCAC CTGAAGACCT TTTGCAGGTG TTGACTTCCT TAGAGAGTGC AATCAAGAAA GAATCTTTGT CATCCAATTT TATGTCGGCA AAGGAGCTTT TGGGAGCTGC TAATGCTGAT GCTGATAATC TGGGATCAGT GGACGTTCTT CCATGGATAC CAAAGACAGT ATCAGCGGTT GCTTTGAGAC TTTCAGAACT TGATGCATCC ATTATTTATG TGAAGCCAGA GAAACCTGAG CTGATCCCTG AAGATGAGAA CGAGCAGATT AGCCTTTTCC CTGGAGATTC CCCTTTCAAA GGCAAAGGAC CCAGAGAGCA AGAAGATCAA CATGAGGTTG TTCCAAACTC GGGTAACAAA CGTAATAAAC GTGCACGAGT AAGCTTGGGA TCTGGATCAA ACAGAAAGGT GAAGAGGAAG AAAGCGCAAA GCGGTCTTAA CAAATTTGTC GTCGGTAGGA GAAATGTTGC AGTCAATAGT AACTTAATGA CTGTTGAGTT GAACCACCAA GTCCCTGGAA AAGGAAAGAG GACGGTTAGA AAAAGACCAG AGAGGATCGA TGAGGATAAT GACCACCTAG TCAATAGAAT GGCTAATATT GTTAGGCCTA AAAGCGAAGA AGTTGAAGAA GATGAGGAAG AAGAAGAGCC AACATTCAGA GACATTGATG AAGACTGGGC AGCAGGTGAA ACTCCTAGAG AGATGGACGA GGACTGGGCC AATGAAACAC CAAACAGAAT GATGACGCCG ATGCAAGTGG ATGATGAAAG TGACAACAGT GTAGGAGTTG AATCAGAGGA TGATGATGGT GGTGGTCAGT TTGTGGATTA CAGTCAGAGA AACAAGTGGG GGTTAGATTG GAATAGTAAC CCAAACGAGG CAATGGAGGA AGAAGTTGTT GGTGTTGGGA GGGTCGAAGG AGAAGATGAC GCCGAGATGA GTGAGAGCTC TGAAGATGAT GATGCTAATA ATGCAGCAAA CAATTACGAC AGAGAATCAG AAGGTTACAG CAGCAGCGAT TCATGAACTT AAGATCTAGT AGCTTGTGAA GAGGGAAGAT TACATTCTTG TTGAAGATAT ATATATATAT ATTTTTATAT AGGAGAAAAG AGAGATAGTA TCAGAATAGG TTTTCACCTA TAGAAGAAGA ACATTTCTGA TTAGTTTTGG TGCAGTTAAA AGCCAAGCCA AGGCATGTAT TTAG |
| Length | 5394 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 11937895.. 11945022 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G28420.1 |
| Description | homeobox-1 |
| TAIR curator summary | |
| Alias | [HB-1][RLT1][homeobox-1][RINGLET 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4 |
Ahg339622 | DNAJ heat shock N-terminal domain-containing protein |
| 8.544 |
Ahg484347 | Protein kinase superfamily protein |
| 12.6491 |
Ahg480602 | ubiquitin family protein |
| 14.9666 |
Ahg483124 | PRP38 family protein |
| 18.5742 |
Ahg482154 | phosphorylcholine cytidylyltransferase |
| 25.0998 |
Ahg323856 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 27.6043 |
Ahg483249 | ATP-binding cassette A1 |
| 28.6182 |
Ahg485417 | Leucine-rich repeat (LRR) family protein |
| 29.2916 |
Ahg490906 | |
| 29.6479 |
Ahg932476 | Protein kinase superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|