| Annotation |
|---|
| Description | jgi|Araly1|480628|fgenesh2_kg.3__3329__AT2G17440.1 |
| Sequence |
AAGAAGAAAA GAACTGACGA AGAAAGAATG AGAAGACGAA GAAGAAAGAG AAAACAAACA AACAAACTAT GGAAACATGA ATATTTTTGA CAATCTTCTT CTTTCTTCTC CTTTGATTTT GTAGAAAATG GATTTGGATT CCAAGGAGAA GGTTGTGGAA GAAATAATGA GAATTCACAG ATCTCTTCCT TGTAGACCAG AGATCGAAGA TGTAGAAACC GCAACTTCTC TGATACAAGA CGTTGAAAAA GAAGATCGGG ATCGCTTAGA AGCCATTGAT AAACAGATGA TTAAACCTTC CTCTGATGTT CCTAAAGAGC TTTTCAATGT GTTGAAGGAG ATGAAGAAAA GTCTTGTTCA TTTCCAAAGC AAAGAACAGA GAAGAGAAGC TACGAAAATT CTCGATCTGG AATCTGTACA CGTTGTGTTC GACGAATTGA TTCAGAGAGC TTCTTTTTGC ATTGCTTCTC CTAACGGCAC CAGTACCACC TCTCTGCATC GGTCTCTTCC GGCACAAGAA CCGGTTGTTT CTTCTCATGA GATTCTTGTG AAGTCAAAGG AAATTATCTC GCGTGATGAT ACGTTTGTGA AGAAAGCTAA ATCTTCGTTT TATAGTGATG GGTTGTTAGC TCCTTGTAAG CCCCAGGTTT TGGATTCAAC ATTTCATCAG GCTAAGAACG TCACAGGTGT AGGCCATGAT GGGGAGAAGT TGAGTCTCAT AAAACTTGCT AGTTTGATTG AAGTATCGGC CAAGAAAGCT ACTCCGGAGC TAAATCTGCA GCACAAGCTG ATGGATCAGC TCGAATGGCT TCCGGATTCT TTAGGCAAGT TATCGAGTCT TGTTAGGCTA GATTTGTCTG AGAATTGTAT TATGGTACTA CCGGCAACCA TAGGAGGGCT TTTGTCCTTG ACGAAGCTTG ATTTGCATTC GAATAGAATT GCTCAGCTCC CTGAGTCTAT AGGAGATTTG CTAAACTTGA TCAACCTGAA TCTTAGTGGA AACCAATTAT CATTTCTTCC ATCAGCATTT AGTAGATTGA TACATCTCGA GGAACTTGAT TTGAGCTCTA ACAGCCTCAC CATTCTCCCT GAATCTATCG GTTCTCTCGT GAGCCTAAAG AAGCTTGAGG TTGAAACAAA TAACATCGAA GAGATTCCGC ATAGTATCTC TGGCTGTTCT TTCCTGAAAG AACTCCGTGC AGATTACAAC CGACTTAAAG CTCTTCCAGA AGCTGTTGGG AAGTTATCTA CCTTAGAGAT TCTGACTGTC CGTTACAATA ACATTCGGCA GCTACCCACA ACAATGTCCT CCATGGCTAA CCTCAAAGAG CTAGATGTGA GTTTCAACGA GCTTGAGTCA GTACCAGAGA GCTTATGTTA TGCCAAAACA CTTGTCAAGC TGAACATTGG GAACAATTTT GCCAACCTGA GATCACTCCC GGGGTTAATA GGCAACCTTG AGAAGCTAGA AGAGCTTGAT ATGAGCAATA ACCAGATCCG TTTCCTTCCT TACTCTTTCA AAACGCTTTC ACAGCTGCGT GTTCTTCACA CAGAACAAAA TCCACTTGAA GAGCTTCCAA GAGATATAAC CGAAAAGGGC GCACAGGCCG TGGTTCAATA CATGAATGAT CTCGTGGAGG CAAGAAACAC CAAATCTCAA AGAACTAAGC CGAAAAAGAG CTGGTTTAAC AGTAGTTGCT TCTTCTGCAA GTCCTCCACC AACTAGAGAA AACAGAGCAG CACGAAGATC CTCTAAACCA CTCTGAACAA ATCTGACCTT TTAATCTTCA GGCAGAACAG AAGAATCAGG ACTGGATCCT AAGTTAAATG GAATTTGTGA ATCTCAAAGT GATTCTATTC TTGTGTCTCT TGATGTAACT CATTTTTTGT TCTTTTGATG TT |
| Length | 1902 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 20809359.. 20812032 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G17440.1 |
| Description | plant intracellular ras group-related LRR 5 |
| TAIR curator summary | Encodes PIRL5, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction. |
| Alias | [PIRL5][plant intracellular ras group-related LRR 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.61577 |
Ahg481069 | SKP1-like 4 |
| 15.8745 |
Ahg930655 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 22.6495 |
Ahg482489 | VQ motif-containing protein |
| 22.8035 |
Ahg492995 | Protein of unknown function (DUF688) |
| 44.2832 |
Ahg470722 | exocyst subunit exo70 family protein B2 |
| 50.8232 |
Ahg496605 | |
| 58.9576 |
Ahg317082 | WRKY DNA-binding protein 58 |
| 61.0901 |
Ahg319227 | valyl-tRNA synthetase / valine--tRNA ligase (VALRS) |
| 67.6387 |
Ahg492615 | OSBP(oxysterol binding protein)-related protein 2A |
| 70.1997 |
Ahg917653 | type one serine/threonine protein phosphatase 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|