Detail



ID : Ahg930498

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930498|scaffold_302955.1
Sequence
TCTTCTTCCT TCTCAGTCAC CATGTATCGT TTCGCTTCTA ACCTCGCCTC CAAGGCAAGG ATTGCTCAAA ATACTCGCCA GGTTTCCAGC AGAATGAGCT GGAGCAGGAA CTATGCAGCG AAAGAAATTA AGTTTGGTGT TGAAGCTCGA GCTTTGATGC TTAAGGGTGT TGAAGATCTT GCCGATGCTG TTAAAGTCAC CATGGGTCCA AAGGGACGTA ATGTTGTGAT TGAGCAAAGT TGGGGTGCTC CTAAAGTGAC AAAAGATGGT GTTACTGTTG CTAAAAGCAT TGAGTTCAAA GACAAAATTA AGAACGTTGG TGCTAGTCTT GTGAAGCAGG TTGCAAATGC TACTAATGAT GTTGCTGGTG ATGGTACTAC TTGTGCTACT GTACTCACCC GGGCTATATT TACCGAAGGA TGCAAATCAG TTGCCGCAGG AATGAATGCA ATGGACTTGC GACGAGGTAT TTCCATGGCA GTTGATGCTG TGGTGACAAA CCTTAAAAGC AGGGCAAGGA TGATCAGCAC ATCTGAAGAG ATTGCACAGG TTGGGACCAT TTCTGCTAAT GGAGAGAGGG AAATTGGTGA ACTGATTGCA AAGGCTATGG AGAAGGTTGG CAAAGAAGGT GTAATCACAA TCCAAGATGG AAAGACATTG TTTAACGAGT TGGAAGTTGT AGAGGGGATG AAATTGGACA GAGGTTATAC TTCCCCTTAC TTTATCACGA ATCAAAAAAC CCAAAAATGT GAACTAGATG ATCCTCTCAT TCTTATCCAT GAAAAGAAGA TCTCAAGCAT CAACTCTATA GTGAAAGTGT TGGAGTTGGC TCTGAAGAGG CAAAGGCCAC TGTTGATTGT GTCTGAAGAT GTGGAAAGTG ATGCTCTTGC AACTCTTATC CTTAACAAGC TCCGCGCCGG AATCAAGGTC TGTGCCATCA AGGCCCCTGG ATTTGGAGAG AATAGGAAGG CCAATTTGCA AGACCTTGCT GCCCTTACTG GTGGAGAGGT TATCACAGAT GAGCTTGGCA TGAATCTGGA GAAGGTGGAC CTGGGCATGC TAGGAACCTG CAAAAAGGTT ACAGTCTCCA AGGACGACAC TGTTATTCTT GATGGGGCTG GCGACAAGAA AGGCATTGAG GAAAGATGTG AACAGATTAG GTCAGCAATT GAACTGAGCA CCTCAGATTA TGACAAGGAA AAACTGCAAG AAAGGTTGGC TAAGCTCTCT GGAGGTGTTG CAGTTTTGAA GATTGGAGGA GCAAGTGAAG CTGAAGTTGG TGAGAAGAAA GACAGAGTGA CAGATGCTTT GAATGCCACT AAAGCAGCTG TTGAAGAGGG TATTTTGCCA GGAGGAGGTG TGGCTCTTCT ATACGCAGCG AGAGAGTTGG AAAAACTTCC AACAGCCAAC TTTGACCAGA AGATTGGTGT CCAGATTATT CAGAACGCAT TGAAGACTCC TGTTTACACA ATCGCTTCAA ATGCTGGAGT TGAAGGTGCT GTTATAGTTG GCAAGCTCTT GGAACAAGAT AACCCGGACC TCGGTTATGA TGCTGCTAAA GGTGAATATG TGGATATGGT GAAGTCCGGT ATCATAGACC CTCTGAAAGT AATCAGGACA GCTCTGGTTG ATGCTGCGAG TGTGTCATCT TTGTTGACGA CAACTGAAGC TGTAGTGGTT GAGCTTCCGA AAGACGAAAA CGAGTCAGGA GGAGCCGGAG CAGGCATGGG TGGAATGGGA GGCATGGACT ACTAGATCCA CTAAATTCTG TCTTT 
Length1775
Protein Sequence
Protein Residue
Map Locationscaffold_3: 10762009.. 10765307
Download Sequence
A.thaliana
AGI-codeAT3G23990.1
Descriptionheat shock protein 60
TAIR curator summarymitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria.
Alias[HSP60][HSP60-3B][heat shock protein 60][HEAT SHOCK PROTEIN 60-3B]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg490823 mitochondrial heat shock protein 70-1
5.91608 Ahg927518 heat shock protein 91
7.68115 Ahg471136 SKP1-like 18
8.60233 Ahg924144 Ribosomal protein S5/Elongation factor G/III/V family protein
9 Ahg483366 Ribosomal protein L1p/L10e family
9.27362 Ahg492124 Co-chaperone GrpE family protein
9.32738 Ahg480759 RNA-binding (RRM/RBD/RNP motifs) family protein
9.79796 Ahg489026 LA RNA-binding protein
10.198 Ahg487773 mitochondrial HSO70 2
10.583 Ahg486983 Mitochondrial glycoprotein family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression