Detail



ID : Ahg480900

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480900|fgenesh2_kg.3__3601__AT2G20650.1
Sequence
TTCCAAGTTT CCACCTTTGT TCTCTCCAAA CATATATTAT ACTAATAGAC TAGAGAACAA GGCCATAAAG TTTTTAACTT TCTCCCAAAA CGAGAGAGAA AGAATCTCAA AGTCAATTGC TGTTCTATGA TTACAGAGTT TGTTTCTCTG TCATAATCTC TTCTAGTTGT GGTTTGTTGG GCTCTCACTT TCTCTTTTAG CCGATTTGAT CTTCGTTTCT TGTGTTTGAC TTCACTTAAA GCAACCTTTT TTATTGATCT TCTTGTCTCC TTTATGTTCT GATGAATCGG CATTGTGAAA CCACACGAGA TTTTGGGTTG TGATATGAAT AATCTGGGGA ATTTCGGGGT TTGGGGATTA GGGTTCTTCT CCTTAGCGAT TTGGTTTGCG GTTTTGCAAC AAGCTAATGG ACTCAGACCC ATTAGGGAGA CTGCTCGATC CTGGGGCGAT GAGTGGCTCT TTGGCAAAAA AGAAAAAAGC GGAGCAGGAC CGTTTTCCGC ATGGAACATA ACAGGAACAT ATAGAGGCTC ATGGAACTTT CTAGATACTG TAAATAGCTC TTCAAAGTTC CCAGATTTCA GAAAAGAAAG TGGTAACTCT GTCATTGAGT TAGTGACAAG TCCAACAAAA ATAACTGGTG TGCATTATGT TCAGGGTGCA GTTGTTTTCC ATGACGTATT TGACAATGAA CACAATGTGG GTGGTGCCCA AATTAAAGTT GAAGGTGTAT ATATTTGGCC CTTTAGACAG CTCCGTCTTG TTGCTAACAG TGGAAAGAAG GGTGATTCAG GACTAGAAGA CGATTATCTT CTCTCCAACC CCTATCATCT GCTCGGAATT TTTTCCTCCC AAGTATTTCA AGAATCTCCA AGAGACAGAA TATTGAAACA GAAAACTTCT CCAATATATG AGATGGAGAA GCACTGCAAT ATCGAAATAG CAGCCCAAAT ATCCCAAAGC GCTTCTAGTG AAAACAATGG GGACAAAGAT CGTTATCATA TCGAAGGATT GATGGAAAGT CCTGCAGTAG ATGATGACGG AGATTGTTTT TCGCCATTGT CGCTGAATGC AACCTCCATA AACGTTGAAG TCTACTATAA CAAAGCTGTG AACTATACAT TGATGGTCAC TTTTGTCTCG TTCCTCCAGG TTCTTTTATT GATCCGGCAA ATGGAGCACA GTAACACACA ATCCGGTGCT GCAAAGGTCT CTATAGTAAT GATCGGGCAA CAAGCCATCA TGGATTCTTA TTTATGCCTT TTACATCTCA CAGCTGGGAT TTTAGTTGAA TCCCTTTTTA ACGCTTTTGC AACAGCTGCG TTCTTCAAAT TTGTCGTGTT TTCGATATTT GAGATGAGAT ATCTTCTGTC CATATGGAAA GCAACCCGGC CTTCAACCAG CGGTGAGGGC TGGGAAACAA TGAGGCGTGA GCTCTCCTTT CTGTACAGCC GTTTCTATGG AATCCTTCTT GGAGGCATAT TGATAATGTA CGAGTTCCAC AACTACATGC GGCCGATCCT CCTACTCATG TACTCATTTT GGATTCCCCA GATAGTTGCA AACGTTGTTC GTGATTCTCG AAAGCCTCTG CATCCTTATT ATATCCTGGG GATGACTGTT ACACGACTTG CTATACCATT GTATGTTTTT GGTTGCCCGA AGAACTTCAT GCGTGTAGAG CCCAGCAAGG CCTGGTGTGT AAGCCTGTGC GCATTCATGG GGTTTCAAGC TGCTGTTCTT CTACTTCAGC ATTATTTCGG GTCTCGTTGC TTTGTCCCTC GGAAGATGCT CCCTGAGAAA TACAGCTACT ACAGAAGATT GGATCATAAT GTAAACCGAA GCAGGGACTG CGTAATCTGC ATGACCACGA TTGATCTCAG ACACCGTATT AATGATTGCA TGGTAACGCC GTGTGAGCAT ATATTCCACT CGGGTTGCTT ACAGAGATGG ATGGATATAA AGATGGAGTG CCCAACATGT CGTCGCCCAC TTCCTCCAGC TTAAGCTTTG GTTCCCTCGG AATCGTCTAT TAACTGCACC CACATTTAAT TGGCTTGGAA AGATATTAGA TGAAAACAGA GCATAGATAG ATGTGTAATA AGTCAATCTC TTTAGTGCAT ATTCATTGGC CATTCTTTTA ATAAAATCCT CCAACATAT 
Length2159
Protein Sequence
Protein Residue
Map Locationscaffold_3: 22597001.. 22600737
Download Sequence
A.thaliana
AGI-codeAT2G20650.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias[FLY2][FLYING SAUCER 2]
Gene coexpression
MR
MR Locus Description
14.8997 Ahg918799 cytochrome P450, family 86, subfamily A, polypeptide 4
17.7482 Ahg928599
57.6888 Ahg925447 RNA polymerase subunit alpha
58.7197 Ahg356713 3-ketoacyl-CoA synthase 20
66.5132 Ahg488242 non-intrinsic ABC protein 14
66.9029 Ahg942385
92.8655 Ahg914459 cadmium tolerance 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression