Detail



ID : Ahg918799

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|918799|scaffold_100080.1
Sequence
AACAATAATA AGAGAGCTAC ATGGAAATAT CCAATGCGAT GCTTCTCGTA GCGGTGGTAA CAGGGTATTG GCTATGGTTC AAGAGGATCT CACGGTGGCT AAAGGGTCCA CGTGTCTGGC CTCTGTTGGG TAGTCTTCCT GGTCTGATAG AGCAACGTGA CAGAATGCAT GAATGGATCA CCGAGAACCT CCGTGCGTGC GGTGGCACTT ACCAGACTTG TATCTTTGCC GTGCCTTTCT TGGCTAAGAA GCAAGGTCTC GTGACTGTCA CGTGTGACCC TAAGAATCTC GAACACATGC TCAAGACCCG GTTCGATAAC TACCCTAAAG GTCCTACATG GCAATCCGTC TTCCACGATC TTCTCGGCCA AGGTATTTTC AACTCCGACG GTGACACCTG GCTCTTCCAA CGCAAAACCG CCGCTCTTGA ATTCACAACA AGGACGTTGC GGCAAGCCAT GGGTAGATGG GTAAACCGAG GAATTAAACT CCGGTTCTGT CCAATTCTTG AAACGGCTCA AGCCAAATCA GAACCGGTTG ATCTCCAAGA CTTAATACTA CGGCTCACAT TCGACAACAT TTGCGGATTG GCGTTCGGTA AGGATACACG AACCTGCGCA CCGGGGCTTC CCGAGAACGG CTTTGCCTCG GCATTCGATC GAGCCACTGA AGCCTCGCTT CAACGGTTTA TCATACCGGA GTTTATGTGG AAGCTGAAGA AATGGCTTGG GCTCGGTTTA GAAGTAAGCT TGAGCCGAAG CTTAGGAGAA ATCGATGAAT ATTTAGCTGC TGTTATAAAT ACACGTAAGC AAGAATTGAT GAGTCAGCAA GAAAGTGGAA CCCACCAGAG ACACGACGAT CTCCTCTCGC GTTTCATGAT GAAGAAAACC GAATCTTACA GTGACACGTT TCTCCAACAG GTGGCGCTTA ACTTTATCCT TGCTGGACGT GACACGTCAT CAGTTGCCCT GAGCTGGTTT TTCTGGCTTA TCACGATGCA TCCAACCGTC GAGGATAAAA TCGTCCGCGA GATCTGCTCC GTTCTGATCG AGACACGTGG CACTGATGAC GTCACGTCTT GGACTGAGGA GCCTCTAGGG TTCGACGAAA TCGACCGTTT GGTTTACCTG AAGGCGGCGA TCTCGGAGAC GCTCAGGCTT TACCCATCGG TGCCGGAAGA TTCGAAACAC GTCGAGAACG ACGACGTTTT ACCGGACGGG ACTTTCGTTC CGGCGGGATC ATCGGTGACG TACTCGATTT ACGCGGCGGG GAGGATGAAA TCGACTTGGG GAGAAGATTG TCTGGAATTT AACCCGGAGA GATGGATTTC TCCGATCGAC GGAAAATTTA TCAATCACGA TCAATATCGG TTCGTGGCGT TCAATGCTGG ACCAAGGATC TGCTTGGGGA AAGATCTGGC GTATCTTCAG ATGAAAACAA TAGCGGCGGC GGTGCTTCTC CGTCACCGGC TTACGGTGGT TCCGGGACAT AAAGTGGAGC AGAAGATGTC GTTGACGCTA TTTATGAAGA ACGGACTTCT GGTGAATCTG CACAAGAGGG ACCTCCAAGG GATCATGGAG AGTCTAGTGG TGAAGAAGAG CGACGGTGTC GTCAACGGTA AATGTAACGG CGTTATTGGT GAAGGCGTCG CCGTTTACTT AAATACGGGA GTTGCGGTGG TTTAAGGCCA ATCACGTCTC TGATT 
Length1705
Protein Sequence
Protein Residue
Map Locationscaffold_1: 239356.. 241161
Download Sequence
A.thaliana
AGI-codeAT1G01600.1
Descriptioncytochrome P450, family 86, subfamily A, polypeptide 4
TAIR curator summaryEncodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed significantly at highest level in mature stems and flowers.
Alias[CYP86A4]["cytochrome P450, family 86, subfamily A, polypeptide 4"]
Gene coexpression
MR
MR Locus Description
8.06226 Ahg326806 Integrase-type DNA-binding superfamily protein
9.05539 Ahg486231
11.8322 Ahg322443 DNAse I-like superfamily protein
12.1655 Ahg329088 OSBP(oxysterol binding protein)-related protein 4B
13.4907 Ahg492392 HXXXD-type acyl-transferase family protein
14.8997 Ahg480900 RING/U-box superfamily protein
16.3095 Ahg470465 glycine-rich protein
22.4499 Ahg891467 alpha/beta-Hydrolases superfamily protein
23.8747 Ahg477360 phosphoenolpyruvate (pep)/phosphate translocator 2
26.5895 Ahg483928
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression