Detail



ID : Ahg481007

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481007|fgenesh2_kg.4__67__AT2G21410.1
Sequence
GAGATCGGAG ACATGGCGGA GAGTCACGGT GGTGGTTGCT GTCCGCCGAT GGATCTGATG CGGTCAGAGC CGATGCATCT CGTTCAAGTC ATCGTTCCCA TGGAATCTGC TCATCTTACC GTCTCTTATC TTGGCGATCT TGGCCTCGTC CAGTTCAAAG ATCTTAATTC TGACAAGAGC CCATTTCAAC GCACTTACGC TGCTCAGATT AAAAGATGTG GAGAGATGGC ACGGAAGCTA CGTTTCTTCA AAGAGCAAAT GTCAAAGGCT GGAGTTACTC CCAAAGAGAC CATAGATGAA GATATTGATA TTGATTTGGA TGATGTAGAG GTAAAGCTTG GAGAGCTAGA AGCTGAACTT GTTGAAATCA ATGCTAATAA TGACAAGTTG CAGCGCTCTT ATAATGAACT TGTGGAGTAC AAGCTCGTTC TTGAGAAGGC TGGTGAGTTT TTTGCTTCAG CCCATAGAAG TGCTAACGCT CAACGGAGTG AGATAGAAAC AGAACAAGTG GATGAAGACC TCCTGGAGGC TCCTTTGTTG CAGGAAGAAA AGTCTGTTGA TCCAACAAAG CAAGTAAAGC TTGGATTCCT CACTGGGCTA GTGCCTCGTG AAAAGTCTAT GGTGTTCGAG AGGATCCTAT TTCGTGCAAC TAGGGGCAAC ATCTTCATAC GACAGTCTGT CATCGAGGAG TCCGTTGTTG ATCCCAACTC TGGGGAGAAG GCTGAGAAAA ATGTATTTGT TGTCTTCTAT TCTGGGGAAA GAGCAAAAAG CAAAATTCTT AAGATATGTG AAGCTTTTGG GGCCAATCGC TATCCTTTCA GCGAAGACCT GGGGAAGCAA GCTCAAATGA TGACTGAGGT TTCAGGTCGG TTATCAGAGC TTAAAACTAC CATAGGTGCT GGGTTGGATC ACCGCAACAT TCTTTTGGAG ACCATTGGAG ATAAATTTGA GCAATGGAAC CTCAAGGTTC GCAAAGAAAA AGCAATCTAT CACACCTTGA ACATGCTTAG TCTAGATGTG ACTAAGAAGT GCCTTGTGGG TGAAGGCTGG AGTCCTGTCT TTGCAGCAAC AGAAGTTCAA GATGCATTGC AGCGTGCCGC GGTTGACTCC AATTCTCAAG TTGGATCAAT TTTCCAAGTC CTGAGGACCA AAGAGATGCC TCCAACTTTT TTCCGCACAA ACAAATTTAC TACTGCTTTC CAGGAAATTG TTGATGCATA CGGTGTGGCC AAATATCAGG AGGCCAATCC TAGTGTATTC ACAATTGTTA CCTTCCCCTT CCTGTTTGCT GTTATGTTTG GTGACTGGGG TCATGGAATC TGCCTGCTGC TTGCAACCAT GTATTTAATA TTGAGAGAAA AGAAACTTTC CAGCCAGAAA CTCGGGGATA TTATGGAAAT GGCTTTTGGT GGCCGTTACG TTATTTTTAT GATGTCACTC TTCTCAATAT ACACTGGTTT AATCTACAAC GAGTTCTTCT CTATACCATT TCCATTGTTT GCTAGCTCAG CATACGAATG CCGTGATGTC TCTTGCAGTG AGGCTACTAC AATTGGTCTG ATCAAAACCC GAGACACTTA TCCATTTGGC GTGGATCCTG TGTGGAAAGG TACCCGCAGT GAGCTACCAT TCCTGAATTC ACTTAAGATG AAAATGTCAA TTCTTATTGG AGTTGCACAA ATGAACCTCG GAATCATAAT GAGCTTCTTT AATGCAAAAT TCTTCAAAAG TGCTGTAAAC GTATGGTTCC AGTTCGTTCC CCAGATGATA TTCTTGAACT GCTTGTTTGG CTATCTTTCG GTCCTCATCA TCATAAAGTG GTGCACTGGT TCTCAAGCAG ATTTATATCA TGTAATGATC TACATGTTCC TGAGCCCTAT GGATGATTTA GGAGAGAATC AGCTTTTCCC TAACCAGAAA ATAGTACAGC TCACATTCCT CTTTCTGGCT TTGGTTTCTG TTCCGTGGAT GTTGTTGCCA AAGCCATTCA TCCTGAAGAA ACAACATGAA GCTAGACATC AAGGTCTGTC ATACGCACAT CTTGATGAGA CAGATGAGAG TCTTCAAGTA GATACAAATG GGGGAGGACA TGGACACGAA GAGTTTGAAT TCAGCGAAAT CTTTGTGCAC CAACTCATTC ACACCATTGA ATTTGTGCTT GGAGCTGTTT CCAACACTGC TTCTTATCTT CGTCTCTGGG CCCTCAGTCT CGCCCACTCG GAGTTGTCGT CAGTCTTCTA CGAGAAGGTC CTCCTTATGG CTTGGGGTTT TAACAATGTC TTCATCTTGA TTATTGGGAT CTTCGTCTTC ATCTTTGCGA CTGTGGGAGT GCTTCTTGTG ATGGAGACAT TGAGTGCGTT CCTTCACGCG CTGCGTCTTC ACTGGGTGGA GTACCAGAAC AAGTTCTACG AAGGCGATGG TTACAAGTTT GCTCCTTTCA CTTTCACTCT CGACGGAAAC GAAGACGAGT GATTGATGTT CCGAATTCCG GAAATGCCTT CTTCTGCGTG TGCATATGTA AGGTATGGGA AGGAAGGATT CTGAGTTCCT TCTCTAATTA ATTTTTAAAG AAATTTGGAT GTTTTCTCTT CCCCTTTTTC TTTTTTAGAA GGCTTTATTG AATTTATTTA CCTTT 
Length2635
Protein Sequence
Protein Residue
Map Locationscaffold_4: 278948.. 284557
Download Sequence
A.thaliana
AGI-codeAT2G21410.1
Descriptionvacuolar proton ATPase A2
TAIR curator summaryVacuolar proton ATPase subunit VHA-a isoform 2. Localized in the tonoplast. Required for efficient nutrient storage but not for sodium accumulation.
Alias[VHA-A2][vacuolar proton ATPase A2]
Gene coexpression
MR
MR Locus Description
12.49 Ahg489422 Tetratricopeptide repeat (TPR)-like superfamily protein
13.2288 Ahg940649
16.9115 Ahg477251 Pre-mRNA-processing-splicing factor
19.8746 Ahg495389 FTSH protease 11
20.2237 Ahg480836 H(+)-ATPase 1
28.1069 Ahg485659 monodehydroascorbate reductase 1
28.9828 Ahg943470 cullin 1
38.1576 Ahg477585 DegP protease 7
39.2683 Ahg490399 Albino or Glassy Yellow 1
39.2938 Ahg474651 ubiquitin-protein ligase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression