Detail



ID : Ahg481110

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481110|fgenesh2_kg.4__170__AT2G22490.1
Sequence
GGAGTGGTCG CTCCCCTCTC TACCCTAAAC ACACTCACCC ACTTTCCTCT GTATAAACCC CTCTCTCTCC TCTCTCTTCT CTCCTGCCAT GAAAATCGCA GTTCCTCGAG ACAAAACCTC CTCAGAAATC TCCCATCTCT GATGACTTTT GCTTCCTTAG TTTTCACTTT ACTGTCCGAA CGCTCTCAAA AACTTTGAGA CACCCCAATA AACGACAAAC CAAACCCATG GCCGAGAATC TTGCTTGTGG TGAAACCACC GAGTCATGGA TCATTGACAA CGACGCCGAT GATATCAACT ATGGCGGCGG ATTTACGAAC GAGATTGATT ACAGTCATCA ACTTTTTACT AAAGACGACA ACTTTGGCGG CAACGGATCA ATTCCGATGA TGGGTTCTTC TTCTTCATCG TCCTTGAGTG AAGACAGAAT CAGAGAGATG TTGGAGAGAG AGATTGAGTT CTGCCCTGGA ACTGATTATG TTAAGAGATT GCTTTCTGGT GATTTGGATT TGTCTGTTAG AAGCCAAGCT CTGGATTGGA TTTTAAAGGT TTGTGCTCAT TACCATTTTG GACCTCTGTG CATATGTCTA TCCATGAACT ACTTGGATCG GTTCTTAACG TCCTATGAAT TGCCGAAAGA CAAGGATTGG GCTGTTCAGT TGCTAGCTGT CTCTTGCTTA TCATTAGCAG CCAAAATGGA AGAAACTGAT GTGCCTCAAA TTGTTGATTT ACAGGTGGAA GATCCCAAGT TTGTTTTTGA GGCCAAAACA ATAAAAAGGA TGGAGCTTTT GGTTCTCAAC ACATTGAACT GGAGATTGCA AGCTCTAACT CCATTCTCCT TCGTTGATTA TTTCGTCGAC AAGATTAGTG GTCATGTGTC AGAGAATTTG ATCTATAGAT CGTCGCGATT CATCTTAAAC ACCACCAAAG CAATTGAATT CTCAGACTTC AGGCCTTCTG AGATAGCTGC AGCAGCAGCA GTATCTGTCT CCATTTCAGG AGAAACAGAA TGCATTGATG ACGAAAAGGC GATGTCTAAT CTCCTATATG TAAAACAGGA GAGAGTGAAG AGATGTTTGA ATCTGATGAG AACTCTCACA GGGGAGAATG TGTCGGGAAC TAGTTTATCG CAGGAGCAGC CGCGATTAGC AGTAAGAGTG GTACCGGCAA GTCCAATTGG AGTGTTGGAA GCAACATGTT TGAGCTATAA GAGTGAAGAG AGAACAGTTG AGTCATGTAC AAATTCCTCA CAGAGTAGTC CAGACAACAA CAACAATAGC AACAAGAGGA GGAGAAAACA ATGAGAGAGA ATAAAAGAGT CATACATTTC TTTTACAACT CAAATCCACA AGGACTCATG ACATTTGAGG TTCTTATTTT TTTTTTCTAC AGAAAATTTC TTTTCTCTCT TTGATTTCTC ATTTTCAATC TAAAAATTGG ATTGGAAATG AGAGTTTTGT GAGAGGGGAA AAAAGAAAAT AAGAGAGAGA GAGAGAGCTC TTACATAAAG GCGGCAAAAT TAATAAGTCA TTATTGATGA TGATGAGAGA CATCCCTAGT TCATGTTCTT GCTCCAAGGG ACTTTTTTTT TTTTTTTTTC TACAGAATGT CAGAGATATA ATTAAAAA 
Length1628
Protein Sequence
Protein Residue
Map Locationscaffold_4: 935719.. 938079
Download Sequence
A.thaliana
AGI-codeAT2G22490.2
DescriptionCyclin D2;1
TAIR curator summaryencodes a D-type cyclin whose transcription level is regulated by sucrose but not phytohormones or nitrate. Protein physically interacts with CDC2A. CycD2 kinase activity is regulated by sequestration of CycD2 protein in a form inaccessible to immunoprecipitation and probably not complexed to CDC2A.
Alias[ATCYCD2;1][CYCD2;1][Cyclin D2;1]
Gene coexpression
MR
MR Locus Description
21.9317 Ahg907410 SWIM zinc finger family protein
22.1133 Ahg495812 DNA ligase IV
26.1916 Ahg922420 Protein of unknown function (DUF604)
27.4591 Ahg942945 SPA1-related 2
32.8024 Ahg477265 DnaJ / Sec63 Brl domains-containing protein
42.4264 Ahg940959 Tetratricopeptide repeat (TPR)-like superfamily protein
43.7035 Ahg895780 zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein
48.9285 Ahg488893 RNA-binding (RRM/RBD/RNP motifs) family protein
49.1121 Ahg923620 NFU domain protein 5
51.9134 Ahg479642 MAP kinase kinase 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression