| Annotation |
|---|
| Description | jgi|Araly1|481449|fgenesh2_kg.4__509__AT2G25930.1 |
| Sequence |
ATCTTTTTGG GCTCCACTTT TCCTATCTCT TTTTGCCCGT TTCCTCTATC CTCTCTCTCC CCACAAGTCA TCTTCTTCTT CCTCCTCTGA ATCTCTGGTT CCTTTTTGCT CTCTCTACTA AATTCACCGA CTCTGTTACT CGATTAGCAA GGTGAAACTC ACTTGGGTTT TGTTTGATTT CTCTTTAGTC CTTTTTTTTT TTAATTTCAT TTTCTCTGAT TGGTGGTGAG ATCTCTATCT TAGTCGGTCC TTTGGGTTAA GATATTTCAT TTGATTGGTG GGTTTGTTTT ATTGAAGCTT CTTGTTACGA AAGTTGGAGT CTTTTTCAAT TTTTAGGTTA AATTATTGAG AGAAAAGGAA GATTTTTGGT GTGAAATTAG GTTGTGAATT GTGTGATGAA GAGAGGGAAA GATGAGGAGA AGATATTGGA ACCAATGTTT CCTCGGCTTC ATGTGAATGA TGCAGATAAA GGAGGGCCTA GAGCTCCTCC TAGAAACAAG ATGGCTCTTT ATGAGCAGCT TAGTATTCCT TCTCAGAGGT TTGGTGATCA TGGAACTTTG CGTAGTAACA ACACAAGCAC TCTAGTTCAT CCTGGACCAT CTAATCAGCC TTGTGGTGTG GAAAGGAACT TATCTGCTCA GCATCTTGAT TCTTCAGCTG CAAACCAAGC AACTGAGAAG TTTGTCTCCC AAATGTCCTT CATGGAAAAT GTGAGATCTG CGGGACAGCA CGATCAGAGG AAAATGGTGA GAGAGGAAGA AGATTTCGCA GTTCCAGTGT ATATTAACTC AAGAAGATCT GAGTGTCATG GCAGAAACAA GACTGGCATT GAGAAGGAAA AACATACCCC ATTGGTGGAA CCTAGCTCTT GTAACTCCAT TCAATTTCAA GAAGTGAATC GCACAGGCGC AATTCAAAAC GTACGTTCAA AACCTGAGGT TAGGGATCAG GTTAAGGCGA AGGCAAAGTC AGGTGGCTTT GTAATCTCTT TAGATTTATC AGTCACAGAG GAAATTGATC TCGAAAAATC AGCATCGAGT TATGACAGAG TAAATGATTG TAATGCTTCC TTGAGACAAG AGTCTAGAAA TCAGTTATAT CGAGATGGTG GCGAAACTCG TGTGAAGGAC ATTGATAATG GAGCTGAATC TCACTTGGAA ACGGAAAGTC ATTCAGAAGA GGGTCATGGC AGTCCTGAAG ACATTGATAC TGGTCGTGAA TACAGCAGAA GCAGAGGATG CGCCTCTCAG CAGCAGATAA ATGAAGAGGC AAGTGATGAC GTTTCTGATG ATTCGATGGT GGATTCTATA TCCAGCATGG ATGTCTCTCC CGATGACGTT GTGGGAATAT TAGGTCAAAA ACGTTTCTGG AGAGCAAGGA AAGCTATTGC CAATCAACAA AGAGTATTTG CGGTTCAACT ATTTGAGTTG CACAGACTAA TTAAGGTTCA AAAACTTATT GCTGCATCAC CGGATCTCTT GCTCGATGAG ATCAATTTTC TTGGAAAAGT TTCTGCTAAA AGCTATCCAG TGAAGAAGCT CCTACCATCA GAATTTCTGG TAAAGCCTCC TCTACCACAT GTTGTTGTCA AACAAAGGGG CGACTCGGAG AAGACTGACC AACATAAAAT GGAAAGCTCA GCCGAGAATG TAGTTGGGAG GTTGTCAAAC CAAGGTCATC ATCAACAATC CAACTACATG CCTTTTGCGA GCAACCCACC CGCTTCACCA GCTGCAAATG GATATTGCTA TCCTCCTCAG CCTCCTCCTT CAGGAAATCA GCAATGGTTG ATCCCTGTAA TGTCTCCTTC AGAAGGGCTG ATATACAAGC CTCACCAAGG TATGGGACAC ACGGGGCATT ATGGAGGGTA TTATGGTCAT TATATGCCTA CACCGATGGT AATGCCTCAA TATCACCCCG GCATGGGATT CCCACCTCCT GGTAATGGCT ACTTCCCTCC ATATGGAATT ATGCCCACCA TGATGAACCC TTATTGTTCA GGCCAACAGC AACAACAACA ACAACCCAAT GACCAAATGA ACCAGTTTGG GCATCCCGGA AATCTTCAGA ACACCCAACA ACAACAGAGC TCTGTAAATG AAGCTGCTGC ACAGCAACAT CAACAGCCAA CAAAGTCTTA TCCGCGGGCT AGAAAGAGCA GGCAAGGGGG CACGGGAAGC AGTCCAAGTG GCCCACATGG AATCTCTAGT AGCAAGTCCT TTCGGCCATT CTCAGCTGTT GATGAGGATA GCAAAATCAA CAATGCACCT GAGCAAATGA TGACAACAAC GACGACGACA AGAACAACTG TTACTCAGAC AACAAGAGAT GGGGGAGGAG TGACGAGAGT GATAAAGGTG GTACCTCACA ATGCGAAGCT CGCAAGTGAG AATGCTGCCA GGATTTTTCA GTCAATACAA GAAGAACGTA AACGCTATGA CTCCTCTAAG CCTTAATCCT CTCTGTCCGT ATTGTACTCA GATATGTATT TTACAAAAGT AGAAAAATTG TGATAGATGT TATCTCAATA TATGTACCAT GTAAACGTAT TATGGTGTAA GCCTCATTTG TATGTGTTAA ATGTCTTAAA GCCTTGAAAT C |
| Length | 2601 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 5101646.. 5105778 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G25930.1 |
| Description | hydroxyproline-rich glycoprotein family protein |
| TAIR curator summary | Encodes a novel nuclear protein that is expressed rhythmically and interacts with phytochrome B to control plant development and flowering through a signal transduction pathway. Required component of the core circadian clock regardless of light conditions. |
| Alias | [ELF3][PYK20][EARLY FLOWERING 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.59166 |
Ahg494356 | ornithine-delta-aminotransferase |
| 10 |
Ahg927353 | metacaspase 4 |
| 19.2614 |
Ahg495042 | exocyst complex component 84B |
| 20.7846 |
Ahg484662 | homeobox protein 34 |
| 21.0713 |
Ahg329184 | MA3 domain-containing protein |
| 21.9089 |
Ahg901082 | Cyclin-dependent kinase inhibitor family protein |
| 22.9783 |
Ahg937735 | SER/ARG-rich protein 34A |
| 26.4953 |
Ahg485927 | LisH/CRA/RING-U-box domains-containing protein |
| 26.6646 |
Ahg490644 | methylthioadenosine nucleosidase 1 |
| 27.8209 |
Ahg942264 | Threonyl-tRNA synthetase |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|