Detail



ID : Ahg927353

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927353|scaffold_202914.1
Sequence
TCTATCAGAT CTTTTTGTCA ATGGCGAAAA AGGCGGTGCT TATTGGGATC AATTACCCAG GAACCAAGGC GGAGTTACGG GGATGCGTCA ACGATGTTCG TCGTATGTAC AAATGTCTCG TCGAACGGTA CGGCTTCTCC GAGGAGAACA TCACCGTTCT CATCGACACC GATGAATCCT CTACTCAGCC CACTGGCAAG AACATCCGCC GCGCGCTGGC TGATCTCGTC GGATCTGCGG AATCCGGCGA CGTTCTTGTC GTTCATTACA GTGGACACGG TACGAGGTTG CCGGCTGAGA CTGGGGAAGA CGATGACACT GGTTTCGACG AGTGTATTGT TCCTTGCGAC ATGAATCTGA TTACTGATGA TGATTTCAGA GATCTTGTGG ACAAAGTTCC TCAAGGTTGC AGAATGACAA TCATTTCAGA CTCTTGTCAC AGTGGTGGCC TTATCGATGA AGCCAAGGAG CAGATTGGAG AGAGCACTAA GAAAGAGGCC GAGGACGAAG ATGAATCTGA AGAATCTTCT TCAAGATTCG GGTTTAGGAA GTTCTTGCGC AGCAAAGTGG AAGGCGCCAT CGAGTCTCGA GGGTTTCACA TTGGAGGGAA CAAGAAGGAT GAAGATGAGG CCGAAGAAAT CGAGACTAAG GAGATTGAGC TAGAAGACGG TGAAAGGATC CATGCCAAAG ACAAATCTCT TCCTCTGCAG ACCTTGATTG ATATCCTCAA GCAGCAAACA GGGAACGATA ATATCGAAGT TGGGAAAATC AGGCCAAGCC TTTTTGATGC GTTTGGTGAT GATTCGAGCC CCAAAGTGAA GAAGTTTATG AAAGTGATCT TAGGTAAGCT TCAGGCTGGA AATGGAGAAG AAGGTGGATT AATGGGAATG CTTGGGAAAT TGGCTTCAGG GTTTCTTGAG GGTAAACTAA ACGATGAAGA CTATGTGAAA CCCGCGATGC AGACACACGT TGGGAGTAAA GAAGAGGTTT ATGCTGGTGG ATCCAGAGGT TCGGTTCCGC TTCCAGACAG CGGGATACTG ATCAGCGGTT GCCAAACCGA TCAGACCTCT GCGGATGCGA CTCCAGCGGG GAATCCAACT GAGGCTTATG GAGCGATGAG CAATTCGATA CAGAAGATAT TGGAGGAGAC AGACGGTGAG ATATCAAACA GAGAAATGGT TACAAGGGCA AGGAAGGCAT TGAAGAAGCA AGGGTTTACT CAGCAGCCAG GTTTGTATTG CCATGATGGG TATGCAAATG CTCCTTTCAT CTGTTGAAAA CAGAGGTTTT ATTGAATGCT T 
Length1301
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17559361.. 17560947
Download Sequence
A.thaliana
AGI-codeAT1G79340.1
Descriptionmetacaspase 4
TAIR curator summary
Alias[AtMC4][AtMCP2d][MC4][MCP2d][metacaspase 4][metacaspase 2d]
Gene coexpression
MR
MR Locus Description
3 Ahg939738 exocyst subunit exo70 family protein A1
4.47214 Ahg490443
9.53939 Ahg489030 calmodulin 6
10 Ahg481449 hydroxyproline-rich glycoprotein family protein
11.7473 Ahg478791 Root hair defective 3 GTP-binding protein (RHD3)
16.4317 Ahg479217 Protein kinase superfamily protein
18.9473 Ahg931117 somatic embryogenesis receptor-like kinase 4
22.5167 Ahg493416 20S proteasome beta subunit D1
22.7376 Ahg483746 transcription regulatory protein SNF2, putative
22.8035 Ahg485868 tryptophan synthase alpha chain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression