| Annotation |
|---|
| Description | jgi|Araly1|494356|fgenesh2_kg.8__172__AT5G46180.1 |
| Sequence |
CTCTAATGGC AGCCACCACG AGACGGTTGC TTCACTGTGT GTCTAAAAGA ATTACTACCG CCGGAGTGCG GCGGAGCTAT GGCGGTCTGC CACAATCGAA TTCTAAATCT CCTCCGACTT CTTCTCAACG ATTGATGGAA TTAGAATCTG AATTCAGTGC CCACAATTAC CATCCTGTTC CGGTTGTGTT TTCTCGCGCA AATGGCTCAA CCATATGGGA TCCTGAAGGA AAGAGATACA TTGATTTTCT TGCAGCTTAC TCTGCTGTTA ACCAGGGACA TTGCCATCCT AAGATCATGA AGGCATTGCA GGAACAAGTG GAGAAACTCA CTTTAAGTTC ACGTGCATTT TTCAACGATA AATTCCCGGT ATTTGCAGAG CGTCTCACAA ATATGTTCGG TTATGATATG GTGCTTCCTA TGAACACGGG GGCTGAAGGT GTCGAAACAG CTTTGAAACT AGCAAGAAAA TGGGGTCATG AAATGAAAAA TATTCCCAAA GATGAGGTTA TAATTGTCTC TTGCTGTGGC TGCTTCCATG GTCGTACATT AGCAATTATT TCCATGAGTT GTGACAACGA TGCTACGCGT GGATTCGGGC CATTGTTGCC TGGGAATCTT AAAGTTGATT TTGGTGACGC TGATTCACTT GAGAAAATCT TTAAAGAAAA AGGAGATAAA ATAGCGGGAT TTCTTTTCGA ACCTATTCAA GGCGAAGCTG GAGTTATTAT TCCTCCGGAC GGTTATTTGA AAGCTGTTAG AGAACTCTGC ACAAAACACA ATGTTTTGAT GATAGCAGAT GAAGTACAAA GCGGTCTAGC AAGATCCGGA AAGATGTTAG CTTGTGACTG GGAAGAAATT CGTCCCGACA TGGTGATACT TGGGAAAGCA TTAGGTGGAG GAGTAATTCC AGTAAGTGCA GTGCTTGCTG ATAAAGATGT GATGCTTCAT ATCAAACCCG GCCAACACGG AAGCACATTT GGTGGGAATC CTTTAGCTAG TGCTGTAGCT ATGGCTTCTT TAGACGTTAT CGAGGAAGAA AAACTAGTGG AAAGATCAGC AAGTCTTGGA GAGGAGCTGA GGATTCAATT GAATGAAATC AAGAAACAGT TTCCGGATTA CATAAAGGAA GTACGAGGAA GAGGACTGTT TAATGCGATT GAGTTCAATA GTGAAAGCTT GTCCCCGGTT TCAGCTTACG ATATTTGCTT GAGCTTGAAG GAGAGAGGAG TCTTGGCTAA ACCGACTCAC AATACTATTG TCCGGTTAAC TCCACCACTC TCCATAAGCT CTGATGAACT CCGAGAAGGC TCCAAGGCTC TTCACGATGT TCTTGAGCTC GATCTTCCAA ATCTGCGGAA AATCAATTCC GGTAAAACCC CGGTTTCTCA CATAACTGAG TGTGATCGCT GTGGAAGAAA CCTCTATGCT TGAACCGGTT TGAAACTTGA CTAGGTTCTG GTTTAATTAG ATTCTTTGTA TCTTGTGATT TCACGAGACA TCACCAGTTT GGTATAGAAA ATATATAATA CGTATAAGGC CGAACCGGAT TGTACCGAGC TTGGTAGAAA TAACTAGTTT ATTTCTGGTT TGGCATTAAA TAAAC |
| Length | 1605 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 1114908.. 1117606 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G46180.1 |
| Description | ornithine-delta-aminotransferase |
| TAIR curator summary | Encodes an ornithine delta-aminotransferase that is transcriptionally up-regulated in young seedlings and in response to salt stress. It is unlikely to play a role in salt-stress-induced proline accumulation, however, it appears to participate in arginine and ornithine catabolism. |
| Alias | [DELTA-OAT][ornithine-delta-aminotransferase] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg920663 | B-block binding subunit of TFIIIC |
| 2.44949 |
Ahg941463 | E1 C-terminal related 1 |
| 4.24264 |
Ahg477582 | NAD(P)-binding Rossmann-fold superfamily protein |
| 4.47214 |
Ahg942061 | RNA recognition motif (RRM)-containing protein |
| 6.16441 |
Ahg330218 | AMP-dependent synthetase and ligase family protein |
| 6.32456 |
Ahg937986 | 20S proteasome alpha subunit PAD1 |
| 7.4162 |
Ahg933239 | Ring/U-Box superfamily protein |
| 9.59166 |
Ahg481449 | hydroxyproline-rich glycoprotein family protein |
| 11.225 |
Ahg476423 | Survival protein SurE-like phosphatase/nucleotidase |
| 11.8322 |
Ahg479281 | Galactose mutarotase-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|