Detail



ID : Ahg494575

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494575|fgenesh2_kg.8__391__AT5G44190.1
Sequence
GTATCATTCT TGTTTTCTCT AAATTTTTCA AATCTTTAGA ATTTTCAAGT TTTTATAAAT GTTAACTGTT TCTCCGGCTC CACTCATCGG AAACAACTCG AAGGATACTT ACATGGCGGC AGATTTCGCA GATTTTACGA CGGAAGGCTT GCCGGACTTT ACGACGGTCG GAGATTTCTC CGATGATCTT CTTGATGGAA TCGATTACTA CGACGATCTT TTCATTGGTT TCGATGGAGA CGATGTTTTG CCGGATTTGG AGATTGATAC GGAGATTCTT GGGGAATATT CCGGTAGCGG AAGAGATGAG GAACAAGAAA TGGAGGGTAA CACTTCGACG GCGTCGGAGA CGTCGGAGAG AGACGGTGGT CATGGGTGTA AGCAAGAGGG TGGCGGTGGT GGTGACGGTG GTGTTAGGGA CAAAACGGTG CGTAGAGGCA AACGTAAAGG GAAGAAAAAT AAAGATTGTT TATCCGATGA TAACGATATT AAGAAAAAAC CCAAGGTGGA TTGGACGCCG GAGTTACACC GGAAATTTGT ACAAGCGGTG GAGCAATTAG GGGTAGACAA GGCGGTGCCG TCACGGATTT TGGAAATTAT GAACGTTAAA TCTCTCACTC GTCACAACGT TGCTAGCCAT CTTCAGAAAT ATAGATCACA TCGGAAACAT CTACTAGCGC GTGAAGCAGA AGCTGCCAGC TGGAATCTCC GGCGACATGC GACGGTGGCA GTGGCCGGAG TAGGAGGAGG TGGGAAGAAG CCATGGACGG CTCCTGCCTT AGGCTATCCA CCACACGTGG CACCAATGCA TCATGGCCAC TTCAGGCCTT TGCACGTGTG GGGTCATCCT ACGTGGCCTA AACACAAGCC TAATACTCCT GCGTCTGCTC ATCGGACGTA TCCGATTCCG TTAGTTGCGG CGGCTCCGGC ATCTTGGCCA GGTCATCCGC CGTACTGGCA CCAACAACCA CTATATCCAC AGGGATATGG TATCGCATCA TCGAATCATT CAAGCATCGG TGTTCCCACA AGACAATTAG GACCCACTAA TCCTCCCATC GACATTCATC CCTCGAATGA GAGCATAGAC GCGGCTATTG GAGAAGTGAT AACAAAGCCG TGGCTGCCGC TTCCTTTGGG ACTGAAACCG CCGTCAGTTG ATGGTGTCAT GACGGAGTTA CAACATCAAG GAGTTTCTAA TGTTCCTCCT CTTCCTTGAG AAAAAAAATC TCCAAAATTT GCCGAAATCT CGATTTTTAA CTTCATTTTT TTTGGTATCT TCTAAGTATT TTTGCAGGGA AAAATACTAT AAATCCTTGT TGCTTGATCA TATGTATTTC TCTATATGAG TGCATGTATC GAAGTTAAGC AACTTT 
Length1376
Protein Sequence
Protein Residue
Map Locationscaffold_8: 3370536.. 3373027
Download Sequence
A.thaliana
AGI-codeAT5G44190.1
DescriptionGOLDEN2-like 2
TAIR curator summaryEncodes GLK2, Golden2-like 2, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK1, Golden2-like 1, is encoded by At2g20570. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.
Alias[ATGLK2][GLK2][GPRI2][GOLDEN2-like 2][GBF'S PRO-RICH REGION-INTERACTING FACTOR 2]
Gene coexpression
MR
MR Locus Description
9.38083 Ahg481966 Phototropic-responsive NPH3 family protein
13.1149 Ahg920316 phytochrome kinase substrate 2
14.4914 Ahg476649 J-domain protein required for chloroplast accumulation response 1
15.2315 Ahg480739 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
23.9583 Ahg497524
26.9444 Ahg946759
27.7489 Ahg924442 Polyketide cyclase/dehydrase and lipid transport superfamily protein
28 Ahg947488 beta-1,3-glucanase_putative
28.4605 Ahg489353 CONSTANS-like 4
29.1548 Ahg933639 TCP domain protein 10
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression