Detail



ID : Ahg482419

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482419|fgenesh2_kg.4__1479__AT2G34560.2
Sequence
AAAGATGGCC ACCGATGAGC CTTCTCAAAC TCGCTGGAGC TTTCTGGAGT TTAAAACGTT TTATGATGCC AAGTTTGGGA GGAAGAAGCT GCCTGAAGAA GACGAATCCA ACAAGGACCA ACCAGAAGAT GGATCATCCA ATGGTGATGT CAACAACAAC TCTTCCCAAG TCACCAATCA GGATGGTAAC ACAGGCTTGG CCAATGGCAA TGTGATTCGC GAGAAGCCGA AAAAGTCCAT GTTTCCACCT TTTGAATCTG CGGAAACTCG TACTCTCGCT GAGAGTTTGA GTAGGGATAT CATCCGTGGG AATCCAAATA TCAAGTGGGA AAGCATCAAA GGGTTGGAGA ACGCGAAAAA GCTGCTCAAA GAAGCTGTGG TGATGCCTAT AAAATACCCC ACCTACTTTA ATGGTCTACT AACTCCATGG AAAGGAATTC TTCTTTTTGG TCCTCCTGGT ACCGGAAAGA CTATGCTTGC AAAGGCTGTT GCTACAGAGT GCAATACAAC ATTCTTCAAT ATCTCAGCCT CATCTGTTGT TAGCAAATGG AGAGGTGATT CTGAGAAGTT GATAAGAGTT CTTTTCGATC TAGCTAGGCA TCATGCACCT TCGACAATAT TTCTTGATGA GATCGACGCG ATCATAAGCC AACGTGGTGG TGAAGGCCGC AGTGAACATG AAGCTAGCAG GCGTCTCAAA ACCGAGCTGC TCATTCAGAT GGATGGGTTA CAGAAAACGA ATGAGCTCGT TTTTGTTTTA GCAGCAACAA ATCTCCCCTG GGAACTAGAT GCAGCTATGC TCCGTCGTCT AGAGAAACGA ATTCTTGTAC CTTTACCGGA TCCAGAAGCA AGAAGAGGAA TGTTCGAGAT GCTCTTGCCG TCACAACCAG GCGATGAGCC ATTGCCTCAT GATGTGCTGG TTGAGAAATC TGAGGGCTAC TCTGGTTCAG ACATTCGAAT ACTTTGTAAG GAAGCTGCGA TGCAACCACT GAGACGCACA TTGGCTATTT TGGAAGACAG AGAAGATGTT GTGCCTGAAG ATGAGCTGCC AAAAATTGGA CCCATCCTAC CAGAAGACAT TGATCGAGCT CTGAGTAACA CTCGACCATC GGCTCATCTG CACGCCCATC TTTACGACAA GTTCAATGAT GATTATGGTA GCCAAATTCT TAAGTAAAAT ACATCTATGT CATCTAGAAC TTGATCATTA TTTGTATGGA AGCATTCACA TTACGGATGC TCAAAGAACT TTTCTGTCTT AAATTATGAA TAAACGCTCC TACTTGCTTG GGACTCAGTT TCAGGGTATT ATTTTCATAT TTTTGGGGAA TTTTTTTTTT TTTTTAAAGT TGGCTTCTT 
Length1359
Protein Sequence
Protein Residue
Map Locationscaffold_4: 15525975.. 15528644
Download Sequence
A.thaliana
AGI-codeAT2G34560.2
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
TAIR curator summary
Alias[AtCCP1][CCP1][conserved in ciliated species and in the land plants 1]
Gene coexpression
MR
MR Locus Description
21.4476 Ahg943964 SAP domain-containing protein
22.1585 Ahg479500 cell elongation protein / DWARF1 / DIMINUTO (DIM)
25.2785 Ahg495608 microtubule-associated proteins 65-1
26.6083 Ahg475305 Adaptor protein complex AP-1, gamma subunit
37.1214 Ahg488058 Rho GTPase activation protein (RhoGAP) with PH domain
45.0333 Ahg491000 beta-galactosidase 3
47.3709 Ahg476635 fatty acid biosynthesis 1
50.6458 Ahg470308 debranching enzyme 1
54.5436 Ahg317012
55.2721 Ahg480231 cycloartenol synthase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression