| Annotation |
|---|
| Description | jgi|Araly1|482825|fgenesh2_kg.4__1885__AT2G38170.1 |
| Sequence |
ACAAAACAAA CATAAAGAAT CAGCAAAACA AAATTCGAAG AGACACCCAA AACAAAAAAA ACTTCATTTG TGTCTCAGAA TTTACAAAGT CTTGAATCAG TAGAGAAATG GCGGGAATCG TGACAGAGCC GTGGTCAGTG GCGGAGAACG GGAACGCAAG CATGACGGCC AAAGGATCGA GTAGAGAACT GAGACTTGGA AGAACAGCGC ATAGCATGTC TTCTTCTTCT CTGAGGAAGA AATCAGACCT CCGAGTGATT CAAAAGGTTC CATACAAAGG ACTTAAAGAT TTTCTCTCTA ATCTTCAAGA AGTCATTCTC GGAACAAAGC TTGCCATTCT TTTTCCGGCC ATACCCGCCG CCATTATTTG CACTTATTGT GGCGTCAGTC AGCCTTGGAT ATTTGGACTT AGCTTGCTAG GACTGACTCC TTTGGCTGAG CGAGTCAGCT TTTTGACAGA GCAACTAGCT TTCTACACCG GTCCTACATT GGGTGGTTTA TTGAACGCAA CTTGTGGAAA CGCGACTGAA TTGATAATCG CAATTCTTGC TTTGACCAAT AACAAGGTCG CAGTGGTGAA ATATTCGCTG CTAGGTTCGA TTTTGTCGAA CCTTTTATTG GTTCTAGGGA CTTCACTCTT CTGTGGAGGA ATCGCTAATA TCCGAAGGGA GCAGCGGTTC GACCGGAAAC AAGCCGATGT GAACTTCTTC TTACTTCTAA TGGGTTTCTT GTGTCACTTG CTGCCATTGT TGGTGGAATA CTTGGCAAAC GGAAAGACTT CGGCTGCTGT TTTGTCCGAC ATGCAACTGA GTATATCGCG AGGCTTCAGT ATTGTTATGT TGATCAGTTA CATCGCATAT CTTGTTTTCC AACTTTGGAC TCACCGCCAA TTGTTCGATG CACAAGATCA GGAGGATGAG TATGATGACG ATGTGGAGGA AGAAACCGCG GTTATTAGTT TTTGGAGCGG TTTTGTCTGG TTGGTTGGGA TGACACTCTT CATCGCATTG CTATCGGAGT ATGTTGTAGC CACGATTGAG GAAGCATCAG ATAAATGGAA CTTATCAGTG AGTTTCATAA GCATCATATT GCTTCCTATT GTTGGAAACG CAGCTGAACA TGCTGGAGCC GTTATTTTTG CCTTTAAGAA CAAGCTCGAC ATATCTTTGG GAGTTGCATT AGGCTCTGCG ACTCAGATTG GCTTATTCGT CGTCCCCTTG ACCATCGTCG TGGCATGGAT TTTGGGAATT AACATGGATC TCAATTTCGG TCTCCTCGAA ACTGGCTGTC TTGCTGTTTC CATTATCATC ACAGCCTTCA CATTACAGGA TGGGAGTTCT CACTACATGA AGGGACTGGT CCTCTTGCTT TGCTATTTCA TTATTGCCAT ATGTTTCTTC GTCGACAAAC TTCCCCAGAA ACAAAATGCT ATACACTTGG GACATCAAGC GATGAACAAT GTTGTCACTG CAACAGGAGG AGGAGTTTTC TCATCTTAAA TGAAGACAAG TACCAATGTG TTGAAACAAA ATTTCCAAAG CGACCAATTT TCTTGATTCA TTTATAAATA TGAAAAGATT TGTCAGAGAG ATTCCTGAGA TTCAGTGAGT ATTATTTCAT TTTTCCAATG TTTGGGTGTC TTGATGAAGA TGAGTTTTGA GAACTTTCTA AATTCTTCTT GTGGGTGGGT TTGCAATGAA CTATCTATGA ATGCCTTTGC CTTATGTCAA ATGTTTTTAT CTCTTTTTGT TAATGTCCTA TCAATTTTTT GAGTAGTCAA TA |
| Length | 1782 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 17524006.. 17528432 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G38170.3 |
| Description | cation exchanger 1 |
| TAIR curator summary | Encodes a high affinity vacuolar calcium antiporter. The residue His 338 is critical to Ca2+ transport activity. Disruption of CAX1 reduces manganese and zinc of shoot tissue and results in a decrease in the activity of vacuolar V-type proton ATPase. |
| Alias | [ATCAX1][CAX1][RCI4][cation exchanger 1][RARE COLD INDUCIBLE 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.2111 |
Ahg495156 | CLPC homologue 1 |
| 9.48683 |
Ahg902514 | Protein of unknown function (DUF630 and DUF632) |
| 14.8324 |
Ahg926134 | 3-ketoacyl-CoA synthase 6 |
| 15.8745 |
Ahg327738 | receptor-like protein kinase 4 |
| 20.7846 |
Ahg929488 | rapid alkalinization factor 23 |
| 26.3629 |
Ahg487877 | kinesin like protein for actin based chloroplast movement 1 |
| 26.3818 |
Ahg488935 | sucrose phosphate synthase 1F |
| 27.55 |
Ahg484330 | Hydroxyproline-rich glycoprotein family protein |
| 27.7489 |
Ahg489176 | serine carboxypeptidase-like 34 |
| 29.5635 |
Ahg496915 | mitogen-activated protein kinase kinase kinase 5 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|