Detail



ID : Ahg489176

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489176|fgenesh2_kg.6__2310__AT5G23210.1
Sequence
TTTTCCAGAA TTTGATTTTT CTCATGTGTC TTATCTTATG AATATGGTTA CCACCCAGTG AGACTACAGA GTGTTCTTAT CTGTCTCTGA ATCCATTCTC TCTCTCTCTC AACACATTAT ATAAACTTAC ACAGTCACTT CACAATTTCT ACAAATTCGA TTTTATTAAA TTATAATAAA ATAAAAAGAA ATGGGTTCTC ATAGTTTTGA GTTCTCTGTT CTTGTCCTAT TTCTTGTGTC CTTTCTTCTT GGCTCATCAT CAGCAGAAAA GCTGTGCAGT GACAACGACG GCGACAACGG TTGTTTCCGG TCTAGGGTTT TGTCGGCGCA ACGAGCTGAT CGAGTGAAGG AGCTTCCGGG ACAGCCACCG GTGAAATTCC GGCAATACGC CGGTTATGTG ACGGTTAATG AAACACATGG AAGAGCATTG TTCTATTGGT TCTTTGAAGC CACTCATAAT CCAAGCAAAA AACCTCTCCT CCTTTGGCTC AATGGAGGAC CTGGATGTTC ATCAATTGGA TTTGGAGCAT CAGAAGAACT TGGACCATTC TTCCCTCAAA ACTCGAGTCA GCCTAAACTC AAGCTAAATC CATACAGCTG GAACAAAGCG GCGAATTTGT TATTCTTGGA ATCGCCGGTT GGAGTTGGAT TCTCCTACAC TAACACAAGC CGTGATATAA ATCAACTCGG CGACACCATC ACAGCGAGAG ACTCGTACAA TTTCCTTGTC AACTGGTTCA AGAGATTCCC TCAATACAAG TCACACGAAT TCTACATCGC CGGTGAAAGC TACGCCGGCC ATTACGTTCC TCAACTTTCG GAGCTCATCT ACAATGAAAA CAAGATTGCG CCCAAGAAAG ATTTCATTAA TCTTAAGGGT TTAATGATAG GAAACGCGTT ATTAGATGAC GAAACGGATC AAAAGGGGAT GATAGAATAT GCATGGGATC ACGCGGTGAT ATCAGATGCA TTGTACAAGA AAGTGAATCA AAACTGTGAT TTCAAACAAA AACTTGTGAC CAAGGAATGC AATGCGGCTC TAGATGAGTA TTTTGATGTA TACAAGATCC TTGACATGTA CAGTCTGTAC TCTCCGAAGT GTGTCCCCAC CACCTCCACG AACTCCTCTA CTTCTCATTC AGTCGCTGGA AACCGCCCCT TACCCGCGTT CCGAAGCGTT CTCCGACCCC GTCTCATCTC TCACAATGAA GGATGGAGGA GGATGGCGGC CGGGTACGAC CCATGTGCAT CGGAGTATAC AGAAAAGTAT ATGAACAGGA GAGATGTTCA GGAGGCACTT CACGCTAATG TCACCAACAT CTCTTACCCT TGGACTCATT GCAGTGACAC TGTCTCATTC TGGTCTGACG CTCCCGCTTC TATGCTTCCA ACCTTAAGAA CACTTGTATC AGCGGGATTA CGCGTATGGG TTTTCAGTGG GGATACAGAT GGACGAATCC CAGTGACCGC AACCAGATAC TCATTAAAGA AGCTTGGTCT TAAGATAGTC CAAGACTGGA CACCTTGGTA CACCAAACTA CAGGTCGGAG GGTGGACGGT GGAGTATGAT GGGTTAATGT TTGTGACGGT AAGAGGAGCG GGACACCAAG TTCCGACATT CAAACCTAGA GAAGCTCTTC AGCTCGTTCA TCATTTTCTA GGCAATAAGA AACTTCCTAC ATATCCCTTT TGATATATTC TCAACCCACA GATTTTATCA TCTTTATATA ATTCTTAAGA AAATAATAAA CAGATTTGAG CAAAACTGGC CATTATATTA GAATTGTATA TATGATTTAT CGCGTTTTAC ATGTTTTCTC GTGTTACTGT GACCTCTAA 
Length1839
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9388269.. 9392797
Download Sequence
A.thaliana
AGI-codeAT5G23210.1
Descriptionserine carboxypeptidase-like 34
TAIR curator summary
Alias[SCPL34][serine carboxypeptidase-like 34]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg494419 subtilase family protein
5.91608 Ahg490499 BR-signaling kinase 3
13.8564 Ahg475230 Glycine cleavage T-protein family
14.8997 Ahg926183 magnesium ion binding;thiamin pyrophosphate binding;hydro-lyases;catalytics;2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases
15.3623 Ahg337067 AAA-type ATPase family protein
15.8114 Ahg478899 Leucine-rich repeat transmembrane protein kinase
16.1555 Ahg317356 with no lysine (K) kinase 1
17.6635 Ahg489767 Pollen Ole e 1 allergen and extensin family protein
21.166 Ahg940220 Integrase-type DNA-binding superfamily protein
27.7489 Ahg482825 cation exchanger 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression