Detail



ID : Ahg483411

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483411|fgenesh2_kg.4__2471__AT2G43100.1
Sequence
ATGGCGTCTT CTCTTCCTAC ATTGCCGCAA GCCTTACCGT CTTCGCTAAC CAAAACTTCT TCCTCGGCTA CCTTCAAATC TCCTTTCCTA AGATTCAATG GTTCCACTTC CTTCATCCCA TCCTCTATCT CCCTCACTTC ACGTGGTACA TCCTCCATGA CCATCATCCC ACGTGCTGCA GCCACAGAAT CCGACTCTAA CGAAGCCTTA GCCAACACTA CCTTCCACGG TCTCTGCTAT GTCTTGAAAG ACAACATAGA CACCGACCAG ATCATCCCAG CAGGAGCCGC TTGCACCTTC CCATCAAACC AGCAAGAACG TGATGAGATC GCTGCTCACG CTCTCTCTGG TCTCCCAGAC TTCCACAAAA CACGGTTCGT TGAGCCAGGA GAGAACAGAT CAAAGTACTC AATCATAATC GGTGGAGAAA ACTTTGGTTG TGGATCGTCA CGTGAACACG CTCCAGTCTG TCTAGGAGCA GCTGGAGCTA AAGCCATAGT TGCTGAATCC TACGCAAGGA TCTTTTTCCG TAACTCAGTG GCTACAGGAG AGGTGTTTCC GCTCGAGTCA GAGGTTAGAG TCTGTGAGGA GTGTAAGACA GGAGACACTG TGACGATCGA GCTGAGTGAT AGTGGTGGTT TATTGACTAA TCACACAACC GGGAAAAACT ATAAGCTGAA GTCGATCGGT GATGCTGGAC CGGTTATTGA TGCTGGTGGG ATTTTTGCTT ACGCGAGGAT GATGGGAATG ATTCCATCAT TAGCTTAA 
Length768
Protein Sequence
Protein Residue
Map Locationscaffold_4: 20032400.. 20033170
Download Sequence
A.thaliana
AGI-codeAT2G43100.1
Descriptionisopropylmalate isomerase 2
TAIR curator summary
Alias[ATLEUD1][IPMI2][isopropylmalate isomerase 2]
Gene coexpression
MR
MR Locus Description
2 Ahg488253 isopropylmalate dehydrogenase 1
3.74166 Ahg929873 branched-chain aminotransferase4
4 Ahg909036 desulfo-glucosinolate sulfotransferase 18
5.19615 Ahg312617 cytochrome P450, family 79, subfamily F, polypeptide 2
6.32456 Ahg326599 2-isopropylmalate synthase 2
6.32456 Ahg493537 cytochrome P450, family 83, subfamily A, polypeptide 1
7.74597 Ahg941820 2-isopropylmalate synthase 2
7.93725 Ahg472380 Phosphoenolpyruvate carboxylase family protein
8.3666 Ahg941819 methylthioalkylmalate synthase 1
8.77496 Ahg938903 isopropylmalate isomerase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression