| Annotation |
|---|
| Description | jgi|Araly1|488253|fgenesh2_kg.6__1387__AT5G14200.1 |
| Sequence |
TCCAAAAAAA ATGGCGGCGT TTTTGCAAAC GAACATCCGT CTGAATTCGA TCAAGATCGT CCCGGGAAGA TACAGTGCTC TCACCGATCA TCAGTTTCGT GCGCCGTATC GAATAAGGTG CGCTGCGGCT TCACCAGGGA AAAAACGGTA TAATATCGCT CTGCTTCCCG GCGACGGTAT TGGTCCAGAA GTTATCTCTG TTGCTAAGAA TGTGCTTCAG AAAGCTGGAT CTCTCGAAGG ACTGGAGTTT GATTTCCAGG AGATGCCTGT CGGAGGAGCA GCCTTGGATT TGGTCGGAGT TCCAATGCCT GAGGAAACTT TCACGGCTGC AAAACAATCT GATGCCATTC TTCTTGGAGC TATTGGAGGG TACAAATGGG ACAAGAATGA GAAACATCTG AGACCTGAGA TGGCTCTGTT TTACCTTCGA AGAGATCTCA AAGTCTTTGC TAATTTGAGA CCTGCTACAG TTTTGCCACA GCTAGTTGAT GCTTCCACAC TGAAGAAAGA AGTAGCAGAA GGTGTTGATA TGATGATTGT TAGGGAGCTC ACAGGAGGTA TTTACTTTGG AGAGCCAAGA GGTATCAAGA TCAATGAAAA TGGCGAAGAA GTCGGCATTA GTACAGAGAT CTATGCTGCT CACGAGGTAC TAAACCTTGA CAGAATTGCT CGTGTTGCAT TCGAGACTGC TAGGAAAAGG CGTGGCAAGC TGTGTTCGGT CGACAAAGCC AATGTGTTGG ATGCATCAAT ATTGTGGAGG AAAAGAGTAA CAGCTTTAGC CTCTGAATAT CCTGATGTTG AACTATCACA TATGTATGTC GATAATGCTG CAATGCAGCT TATCCGTGAC CCGAAACAGT TTGACACAAT CGTCACCAAT AACATTTTCG GTGATATATT GTCTGATGAA GCTTCAATGA TCACTGGAAG CATTGGAATG CTTCCATCTG CAAGTCTCGG TGAATCGGGA CCTGGACTCT TTGAACCTAT ACATGGTTCA GCACCAGATA TAGCTGGACA AGACAAAGCA AACCCATTGG CCACCATTCT CAGCGCGGCG ATGCTTCTGA AGTATGGACT TGGAGAAGAA AAGGCTGCAA AGAGGATTGA AGACGCGGTC GTGGATGCTC TGAACAAAGG GTTCAGAACC GGAGACATCT ACTCCCCCGG AAATAAACTG GTGGGATGCA AGGAAATGGG TGAGGAGGTT CTCAAATCAG TGGAATCCAA AGTTCCAGCT ACTGTTTAAG TTTATTGATG ATTTGAAGCA CTTAAAAAAG TGTGTAGCCC TTGGTTTTAC GGTTACTTAT ATGCTAATCC ATGTAACATT CTAGCTTCTA TAATAAATAA AATATTTGGG ATCGATTCTG CAATTCAAAG AGAAGATTCT CCAAGAATAT TTGACATGTC TCCTGCCTCA CTTACCTTGT TCAGTTCTTG AAGATTGAGA AGTTCTCTTC AACTACAAAC TCAGTATCAT CTTCAATCAA TATTTGTTTA ACGAAATAAG TTTCAAGAGA AGACAAGAAA CTATGATTTT T |
| Length | 1541 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 5523491.. 5525714 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G14200.1 |
| Description | isopropylmalate dehydrogenase 1 |
| TAIR curator summary | The AtIMD1 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids. Encodes methylthioalkylmalate dehydrogenase. Involved in glucosinolate biosynthesis, in methionine chain elongation. |
| Alias | [ATIMD1][IMD1][ARABIDOPSIS ISOPROPYLMALATE DEHYDROGENASE 1][isopropylmalate dehydrogenase 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg483411 | isopropylmalate isomerase 2 |
| 2.44949 |
Ahg929873 | branched-chain aminotransferase4 |
| 3.16228 |
Ahg941820 | 2-isopropylmalate synthase 2 |
| 3.16228 |
Ahg493537 | cytochrome P450, family 83, subfamily A, polypeptide 1 |
| 3.4641 |
Ahg938903 | isopropylmalate isomerase 1 |
| 4 |
Ahg938383 | Class I glutamine amidotransferase-like superfamily protein |
| 4.24264 |
Ahg326599 | 2-isopropylmalate synthase 2 |
| 4.47214 |
Ahg921468 | UDP-glucosyl transferase 74B1 |
| 4.58258 |
Ahg472380 | Phosphoenolpyruvate carboxylase family protein |
| 6 |
Ahg312617 | cytochrome P450, family 79, subfamily F, polypeptide 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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