| Annotation |
|---|
| Description | jgi|Araly1|326599|fgenesh1_pm.C_scaffold_6001819 |
| Sequence |
ATGGCTTCGT TACTTCTCAC ATCTTTCGGT ATGATCACCA CCACCGGTCC CACCCTTGTT GTCCGGTCAG TGTTACCCAT TGGATCTTCT CAGCCCTCAA TCCGCCTGAC CCGCCCGTGC AACAAGCCGA CTTTGTTCAT CTCATGTTGC TCCTCTGAGT CCAAAAAGGT GGTAACTAGT GCTACTGACC TCAAACCTAT CGTGGAACGG TGGCCAGAGT ACATACCGAA CAAGCTCCCC GACAAGAACT ATGTACGTGT ACTCGACACG ACACTTCGTG AGGGCGAACA AGCTCCAGGT GGATCCCTTA CTCCGCCGCA GAAGCTAGAG ATTGCCCGGC AACTCGCTAA ACTCCGAGTA GACATCATGG AAGTCGGTTT TCCGGGGTCA TCTGATGAAG AGTTCGAAAC CGTTAAAACT ATCGCTAAGA CCGTGGGGAA TGAGGTGGAT GTGGAAACAG GTTATGTCCC GGTGATATCC ACCCTCGCAC GATGCATAAA TAGAGACGTT GAGGCCGCTT GGAAGGCGGT GAAGTACGCG AAGAGGCCAA GGATATGCAT ATTTACATCT ACTAGTGATA TTCACATGAA CTATAAGTTG AAAAAGACTA AAGAAGAAGT GATCGAGATG TCCTTGAGTA GTATTAGGTT CGCTAAAAGC TTAGGCTTCC ATGACATCCA ATTTGGTTGC GAAGACGGCT GCAGGTCGGA GAAGGAGTTT GTATGTAAGA TTCTAGGAGA AGCGATAAAA GCGGGTGCTA CTTCGGTGTG CATCGCGGAC ACGGTAGGGA TCACCATGCC ACATGAATTC GGAGAACTCG TGACCTTTGT CAAAGCAAAC ACTCCAGGAA TTGATGATGT TGTCTTCAGC GTTCATTGTC ACAACGACCT TGGTCTTGCT ACCGCAAACA CAATCGCTGC TGTATGTGCC GGAGTGAGAC AATTCGAAGT AACAATCAAC GGAATTGGTG AAAGAAGTGG GAATGCGCCG CTTGAAGAGG TCGTGATGGC TTTGAAATGT CGAGGAGCAT ATCTTATGGA TGGTGTTTAC ACAAGAATAG ACACACGCCA AATTATGGCT ACTAGCAAGA TGGTTCAAGA GCATACCGGC TTGTATGTTC AACCACATAA GCCAATAGTT GGAGACAACT GTTTTGTTCA TGAAAGCGGC ATTCACCAGG ATGGAATATT AAAAAATCGA AGTACATATG AGATTTTATC ACCAGAAGAT GTTGGAATCG TAAAATCGCA AAATTCAGGC ATTGTTCTTG GAAAGCTTAG TGGACGTCAT GCTATAAAAG ACAGGCTTAA AGAGTTGGGA TATGAAATCG ATGATGAGAA ATTCAACGAA ATCTTCTCAC GATTCAGAGA TTTAACCAGT AGAATTACCG ACGCTGATCT GAAGGCATTA GTGGTGAACG GTGATGAAAT CACATCAGAG AAATCAAACA GTAAAGGAAT TAACAACCTT ATGTCAAGTC CTCATATTTC CTCTGTTGTA TAA |
| Length | 1503 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 9291473.. 9295549 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G23020.1 |
| Description | 2-isopropylmalate synthase 2 |
| TAIR curator summary | methylthioalkymalate synthase-like. Also known as 2-isopropylmalate synthase (IMS2). encodes a methylthioalkylmalate synthase involved in the biosynthesis of aliphatic glucosinolates which accepts all the omega-methylthio-2-oxoalkanoic acids needed to form the known C3 to C8 glucosinolates in Arabidopsis. |
| Alias | [IMS2][MAM-L][MAM3][2-isopropylmalate synthase 2][METHYLTHIOALKYMALATE SYNTHASE-LIKE] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg929873 | branched-chain aminotransferase4 |
| 2.82843 |
Ahg941820 | 2-isopropylmalate synthase 2 |
| 3 |
Ahg927551 | aspartate kinase 3 |
| 3.4641 |
Ahg941819 | methylthioalkylmalate synthase 1 |
| 4.24264 |
Ahg488253 | isopropylmalate dehydrogenase 1 |
| 4.47214 |
Ahg312617 | cytochrome P450, family 79, subfamily F, polypeptide 2 |
| 4.89898 |
Ahg479487 | Leucine-rich repeat protein kinase family protein |
| 5.91608 |
Ahg920545 | cytochrome p450 79f1 |
| 6 |
Ahg479786 | homocysteine S-methyltransferase 3 |
| 6.32456 |
Ahg483411 | isopropylmalate isomerase 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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