Detail



ID : Ahg483774

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483774|fgenesh2_kg.4__2834__AT2G46260.1
Sequence
AGAGAGAGAC TTTTTTAGGG TTTCTTTGTT ATTTTCGTTC CTCAAAAAAC CTTTTCGAAT TTTTGACCCT TATAGTTTTC CTGATTCTTC TGCTCGGTTC TCGCCGGAGA GAAGACGGAG AAGAGGGTTT TCGAAAAGGA GGATGAGAGG TTCCAATAAC ACCGATCTAT TTGACCCTAA GACGGAGATG GATTCCAATT TCTCCCGCCA TGGTTCTTCC TCCGAAGGTG ATTTTGGTTT CGCTTTCAAT GACAGTAACT TCTCCGATCG TTTGCTCCGG ATCGAGATCT TGGGTGGGCC TTCGGATTCT AGGTCTGATG GTGAAGGATG TACGAGTATT GCCGATTGGG CTCGTCACCG CAAGAGAAGA AGAGAGGACA ACAAGAAGGA CAATGGTGTT GCGATTTCAG ACATTGTGGC ATGTGCTGAA GAACAGATTT TAACCGATAA CAACCAACCT GATATGGATG ATGGTCCTGG TGGTGATAAT CTTGACGATG AAGGAGAGGC TATGGTCGAA GAGGCTTTAT CAGGTGATGA CGATGCATCT AGCGAGCCAA ATTGGGGTAT TGATTGTTCT ACTGTTGTTA GAGTTAAAGA ACTGCATATT AGTTCCCCTA TCTTGGCTGC TAAAAGCCCC TTTTTCTACA AGTTGTTTTC TAATGGAATG AGGGAATCAG AACAAAGACA TGTAACCCTT AGAATTAGTG CACAAGAGGA AGGTGCTTTG ATGGAGCTTT TAAACTTTAT GTATAGCAAC TCTCTAAGTG TCACAACAGC ACCTGCTTTA TTAGATGTGC TTATGGCTGC TGACAAGTTT GAGGTTGCTT CCTGCATGAG GTATTGTAGT AGACTACTGC GCAATATGCC CATGACCCCT GATTCCGCTT TGCTCTATCT CGAGCTTCCC TCTAGTGTTT TAATGGCTGA AGCAGTCCAA CCTCTAACCG ATGCAGCAAA GCAGTTCCTT GCCTCCCGCT ACAAGGATAT TACCAAATTT CATGATGAGG TTATGGCCTT ACCATTGGCT GGAATTGAGG CGATACTGTC GAGCGATGAT CTCCAAATTG CTTCTGAGGA TGCTGTTTAT GATTTTGTTT TGAAATGGGC AAGGGGACAG TACAGTTCAT TGGAAGACCG TAGAGAGATT CTGGGTTCAC GCCTTGCGCT CTACATCCGC TTCCCATACA TGACATGTCG AAAGCTGAAA AAGGTACTAA CGTGTAGCGA TTTTGAGCAT GAAGTAGCAT CAAAGCAAGT ATTAGAAGCG CTCTTCTTCA AAGCAGAAGC CCCACACAGG CAACGCATCC TCGCAGCTGA AGGATCAGAC TCCTTGAATC GCCGTTTCAT AGAGAGGGCT TACAAATACA GACCCGTAAA AGTGGTGGAG TTTGAGCTTC CTCGGCCGCA ATGTGTAGTG TACTTGGACT TGAAGCGAGA GGAATGCGCA GGATTGTTCC CTTCGGGAAG AGTCTATTCT CAGGCCTTCC ACTTAGGAGG TCAAGGGTTC TTTCTCTCGG CACACTGCAA CATGGACCAG CAAAGCTCGT TCCACTGCTT TGGGCTATTC CTCGGGATGC AAGAAAAAGG AGCTGTGAGT TTTGGTGTGG ACTACGAATT CGCGGCAAGA GATAAAAAAT CATCCGAAGA ATACGTAAGC AAATACAAAG GAAACTACAC ATTCACAGGG GGGAAAGCAG TTGGTTACAG AAATCTTTTT GGGATTCCGT GGACTTCGTT CATTGCTGAT GACAGTCAGC ATTTCATCAA TGGCATTCTC CATCTCAGAG CCGAGCTCAC CATTAAGCGT TCCTCAGACC TGCACTGACT GTTTTCTCTC TCTCTCTTTC TCTACATGGC CACGTTTAAG TTGTATTATC TCGTTATGTA GCCAGCTCTA ACCACGAGTG TCTTTTGTA 
Length1919
Protein Sequence
Protein Residue
Map Locationscaffold_4: 21297712.. 21300330
Download Sequence
A.thaliana
AGI-codeAT2G46260.1
DescriptionBTB/POZ/Kelch-associated protein
TAIR curator summary
Alias[LRB1][light-response BTB 1]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg496927 C2H2-like zinc finger protein
13.784 Ahg947365 PRP38 family protein
14.6969 Ahg481564 DNAJ heat shock N-terminal domain-containing protein
17.8885 Ahg950284 WRKY DNA-binding protein 2
21.6102 Ahg487900 RING/U-box superfamily protein
26.1534 Ahg485399 SNF1-related protein kinase 2.2
28 Ahg471712 protein-protein interaction regulator family protein
29.189 Ahg492640 Alternative oxidase family protein
33.1059 Ahg478299 RING/U-box superfamily protein
37.47 Ahg487067 ubiquitin-protein ligase 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression