Detail



ID : Ahg945660

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945660|scaffold_701889.1
Sequence
TTGAAATCGA GTAGAAGCAG AGATGGTGGT AAGGAAGGTG GGCAAGTATG AATTAGGTAG AACAATCGGC GAAGGTACCT TCGCTAAAGT CAAGTTCGCT CAGAACACAG AGACCGGTGA GAGCGTCGCC ATGAAAATCG TGGATCGTAG TACCATCATC AAACGCAAGA TGGTTGATCA GATTAAGAGA GAGATCTCGA TTATGAAGCT TGTTCGTCAT CCTTGTGTTG TTCGTCTTTA TGAGGTTCTA GCAAGCCGCA CAAAGATTTA TATCATCCTG GAGTACATTA CTGGTGGTGA ACTGTTTGAT AAAATTGTTC GTAATGGACG ACTTGGTGAA TCAGAAGCTA GGAAATACTT TCAACAGCTT ATTGACGGAG TTGATTACTG TCATAGTAAA GGTGTCTACC ACAGAGATCT AAAGCCGGAA AATCTTCTGC TGGACTCTCA AGGAAATCTC AAGATATCTG ATTTTGGTCT CAGTGCATTA CCAGAGCAAG GAGTTACCAT CCTAAAGACA ACATGTGGAA CTCCCAATTA CGTTGCTCCT GAGGTTCTCA GTCACAAGGG TTACAATGGT GCCGTGGCAG ATGTCTGGTC CTGTGGGATC ATCCTTTATG TTCTTATGGC AGGATATCTT CCATTTGATG AAATGGATCT ACCAACTTTA TATAGTAAGA TCGACAAAGC TGACTTCGCT TGCCCCTCAT ATTTTGCCTT GGGTGCAAAG TCCTTGATTA ATAGAATTTT GGATCCAAAT CCTGAAACTC GAATTACAAT TGCAGAAATC AGGAAAGATG AGTGGTTTTT AAAGGATTAC ACTCCTGTAC AACTTATCGA TTACGAACAT GTAAACCTGG ATGATGTATA TGCTGCTTTT GATGATCCGG AGGAACATAC ATATGCACAG GATGGAACAG GGTACACGGG TCCACTGACT CTAAATGCGT TTGACCTAAT TATTCTATCT CAGGGCCTGA ACCTCGCAAC TCTTTTTGAC CGTGGAAAGG ACTCCATGAA GCACCAGACA AGGTTCATCT CACACAAGCC AGCAAACGTG GTTCTCTCAA GCATGGAAGT TGTGTCGCAG TCTATGGGCT TTAAGACACA CATTCGTAAT TACAAGATGA GAGTCGAAGG ATTATCTGCA AATAAGACGT CTCATTTCTC TGTCATTCTA GAAGTATTCA AAGTTGCACC ATCAATACTC ATGGTAGACA TTCAAAATGC AGCAGGAGAC GCAGAAGAAT ACCTTAAGTT CTACAAGACT TTTTGTAGTA AGCTTGATGA CATCATTTGG AAGCCGCCAG ATGCATCTAT GAGAAATCGA GTCACCAAGG CCAAGAGTAA AAGACGTTGA ATCCATGTGT GTTATTCAAG 
Length1380
Protein Sequence
Protein Residue
Map Locationscaffold_7: 7074075.. 7077107
Download Sequence
A.thaliana
AGI-codeAT4G24400.1
DescriptionCBL-interacting protein kinase 8
TAIR curator summaryEncodes a CBL (calcineurin B-like calcium sensor proteins) -interacting serine/threonine protein kinase. Regulates the low-affinity phase of the primary nitrate response.
Alias[ATCIPK8][CIPK8][PKS11][SnRK3.13][CBL-interacting protein kinase 8][PROTEIN KINASE 11][SNF1-RELATED PROTEIN KINASE 3.13]
Gene coexpression
MR
MR Locus Description
13.1909 Ahg484003 reduced epidermal fluorescence 4
14.4914 Ahg487340 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein
23.7487 Ahg939865 Enhancer of polycomb-like transcription factor protein
23.8747 Ahg493153 SCARECROW-like 13
28.8097 Ahg951196 Glycosyl hydrolases family 31 protein
32.3265 Ahg902795 WD40/YVTN repeat-like-containing domain;Bromodomain
37.3363 Ahg481406 DNAJ heat shock N-terminal domain-containing protein
38.3797 Ahg314946
42.4264 Ahg491213 GTP binding protein beta 1
43.7035 Ahg478029 Sec23/Sec24 protein transport family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression