Detail



ID : Ahg484136

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484136|fgenesh2_kg.5__128__AT2G02130.1
Sequence
ACACTTCTTT TGAAATCTCT CTCTATCTCT AAAAATGAAG CTCTCTATGC GTTTGATCTC GGCTGTTCTC ATCATGTTCA TGGTATTCGT CGCCACTGGG ATGGGTCCAG TCACTGTGGA GGCACGCACG TGTGAGTCAA AGAGCCATAG GTTCAAGGGT CCATGCGTGA GCACACACAA CTGTGCAAAC GTGTGCCACA ACGAAGGCTT TGGCGGAGGT AAATGCCGTG GATTCCGTCG TCGTTGCTAC TGCACCAGAC ATTGCTGATC CATCCATTCT CATGACTCAA TCTTTGATCC ATCGTCGTGT GTTACTTCTT TCTTATCTAA ATCTTCCGTA CAGTACCATG TAGTACCGTA CATGAGTGTG TTCCTCAATA AGTCTTTGGT GTTTTGTGTG TTTCCGGTTT TAATGTAATG TTAAATCAAT GAATGGCTTT GTATTATACT ATTGTATTAT GGATCTCAAT CTA 
Length473
Protein Sequence
Protein Residue
Map Locationscaffold_5: 706898.. 712631
Download Sequence
A.thaliana
AGI-codeAT2G02130.1
Descriptionlow-molecular-weight cysteine-rich 68
TAIR curator summaryPredicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.
Alias[LCR68][PDF2.3][low-molecular-weight cysteine-rich 68]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg478433 manganese superoxide dismutase 1
3.4641 Ahg475706 thioredoxin-dependent peroxidase 1
12.9615 Ahg489940 nucleoside diphosphate kinase 3
13.3417 Ahg905237 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
14.4914 Ahg899683
14.8997 Ahg939998 Cytochrome P450 superfamily protein
15.2315 Ahg904413 phosphoesterase
16.9411 Ahg945603 HVA22 homologue D
19.0526 Ahg495994 rotamase CYP 7
20 Ahg488334 Gibberellin-regulated family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression