| Annotation |
|---|
| Description | jgi|Araly1|484824|fgenesh2_kg.5__816__AT3G43920.1 |
| Sequence |
ATGCATTCCT CGTTGGAGCC GGAGAAAATG GAGGAAGGAA GCAATTCGCT TAAGAGGAAA TTCTCTGAAA TCGATGGAGA TCAAATTCTT GCTTCTGTCT CTTCTCCTAT GATGGTTGAA TCTAATGGTA GTTATGAGTT GAAAGTGTAC GAGGTTGCTA AGAACAGGAA CATAATTGCT GTTCTTGGGA CAGGAACTGA TAAGTCAGTG ATCACTAAGA TGCTTATCAA AGCCATGGGT TGTTCTGATA CAGATAAAAG ATTGATAATT TTCTTGGCTC CAACTGTCAA TATTCAATGC TGTGAGATCA GAGCGCAAGT GAATTTGAAG GTTGAAGAGT ACTTTGGAGC TAAAGGAGTT GATAAATGGA CATCTCAGCG CTGGGATGAG GAAGTTAGCA AGCACGATGT AAGTTTGGTT ATGACTCCTC AAATACTGTT GGATGCCCTT AGAAGTGCAT TTCTGAAACT AGAGATGGTA TGTCTTCTAA TATTAGACGA ATGCCACCGC ACCACTGGTA ATCATCCCTA TGCAAAGTTA ATGAAGATTT TTAATTCTGA AGAGGGGAAA GGGGTAGAAA AGTTTGCTAA AGCGGTTAAA GAAGGTCCAA TATTCTATGA CCCATCACCA TTCCGTAGTT TGGAATTGAA AGAAAAGTTA GAGACTTCAC ACCTCAAGTT TGATGCTTCT CTTAGAAGGC TTCAAGAGTT GGAAAAAGGC AGTTTTCTCA ACATGGATAA TAAGTTTGAG ACATATCAAA AGAGATTGTC CATCGACTAC AGAGAGATTT TGCATTGCCT TGATAATCTT GGCCTGATTT GCGCACACTT GGCGGCTGAA GTCTGCTTGG AGAAAATCTC AGATACGAAA GAGGAAAGTG AAACTTATAA AGAATGGTCA ATGGTGTGCA AGGAATTTCT AGAGGATATT TTATCCACAA TTGGGGTGTA TTTGCAGCAA GGAGATAAGA ATTCGGTAGA TTTGCAGCAA AACCGTCTGT CAGCAGTAAA TTCTGGACAT GTATCTCCAA AGTTAAAAGA ACTCTTCCAT CTATTGGATT CATTTAGAGG TGAAAAGCAA AAACAGTGCC TTATTTTAGT TGAGAGAATT ATAACTGCGG AAGTGATCGA AAGATTCGTG AAGAAAGAAG CCTCTTTAGC TTACCTCAAT GTCTTGTATT TAGTCGGAAA CAACCCCTCC ACCAATGCAT CAGCACAGAA AACGCAAATT GAAATCCCTA ATTTATTTCA TGATGGCAAG GTGAATCTTT TGTTTATCAC GGATGTGGTT GAAAAGGGAT TTCAGGTTCC AAATTGCTCA TGCATGGTTT GTTTTGACCT GCCCAAAACA GTGTGTAGTT ACTCGCAGTC TCAAGAACAT GCCAAACAGA GTAATTCTAA GTCTATCATG TTTCTTGAAA GGGGGAACCC GAAACAAAGA GACCATCTGT ATGACCTTAT GCGAAGAGAA GTCCCAATTC GAGATCCAGA AGCTCCAAAC TTGAAATCGT GTCCACCTCC AGTGACAAAT GGCCATGGCG TGAAGGAGAT TGGAACCATG GTTATCCCAG ATTCTAACAT AACTGTATCT GAGGAAGCAG CTTCCACACA AACTATGATT GATCCTCCTA GCAGAAATGA GCAGTTACCA CCATGTAAGA AGTTACGCTT GGATAACAAT CTTTTACAAT CCAGCGCCAA AGAGAAGGTT GCCTCTTCTA AAAGTAAATC ATCTTCCTCG GCTGCAGGTT CAAAAAAACG TAAGGAGTTG CACGGAACAA CCTGTGCAAA CGCATTGTCA GGAACCTGGG GAGAAAATAT TGATGGCGCC ATCTTTCAGG CTTATAAGTT TGACTTCTGT TGTAATATTT CTGGCGAAGT ATACTCGAGT TTCTCTCTTT TGCTTGAGTC AACCCTCGCC GAGGATGTTG GTAATGTTGA GATGGACCTT TACTTGGTCA GGAAGCTTGT GAAGGCTTCT GTCTCACCTT GTGGCCAGAT ACGTTTGAGT CAAGAGGAGT TGGTCAAAGC AAAGTACTTT CAGCAGTTTT TCTTTAATGG CATGTTTGGA AAGTTATTTG TTGGATCTAA GTCACAGGGA ACGAAGAGAG AATTTTTGCT TCAAACTGAC ACAAGTTCTC TTTGGCACCC TTCCTTTATG TTTCTACTGC TACCAGTTGA AACAAAGGAT CTAGCTTCGA GTGCGACAAT TGATTGGTCA GCTATCAACT CCTGTGCCTC AATAGTTGAG TTCTTGAAGA AAAATTCTCT TCTTGAACTT CAGGTTAGTG ATGGGAATCA GTGCAACACC TCATCCGATC AGGAAGTCTT ACTCGACGAT AAAATGGAAG AAACGAATCT GATTCATTTT GCCAACGCTT CGTCTGATAA AAATAGTCTT GAAGAACTTG TGGTCATTGC AATTCATACT GGAAGGATAT ACTCTATAGT TAAAGCAGTA AGGGATTCTT CTGCTCTGAG CCCGTTTGAG TGCGACGCCT CGTCAGAATA TGCTAGTTAT GCAGAATATT TTAATAAAAA GTATGGGATT GTTTTGGCGC ACCCAAATCA GCCGTTGATG AAGTTGAAGC AGAGTCACCA TGCGCACAAC CTTTTAGTCG ACTTCAATCA AGAGATGGTT GTGAAGACAG AACCAAAAGC TGGCAATGTT AGAAAAAAAA AACCAAATAT CCATGCGCAT TTGCCTCCTG AGCTTTTGGC CAGAATTGAT GTACCGCGTG CTGTGCTAAA ATCAATCTAC TTGCTGCCCT CAGTGATGCA CCGCCTAGAG TCTCTAATGT TGGCTAGCCA GCTTAGGGAA GAGATTGATT GTAGCATCGA TAACTTCAGT ATATCAAGTA CCTCGATTCT TGAAGCAGTT ACAACACTTA CATGCCCCGA AGCATTTTCA ATGGAGCGGT TGGAACTGCT GGGGGATTCA GTCTTGAAGT ATGTTGCGAG CTGTTATCTA TTCCTTAAGT ATCCTGACAA AAATGAGGGA CAACTATCAC GGCAGAGGCA ATCGATTATA TCTAACTCAA ATCTTCATCG CTTGGCAACC AATCGCAAAC TACAGGGATA CATAAGAAAC GGCGCTTTTG AACCGCGTCG CTGGACTGCA CCTGGTCAAT TTTCTCTTTT TCCTGTTCCT TGCAAGTGTG GGATTGATAC TAGAGAAGTA CCATTGGACC CAAAATTCTT CACAGAAAAC ATGACTATCA AAATCGGCAA GTCTTGCGAC ATGGGTCATA GATGGACAGT TTCAAAATCT GTATCAGATT GCGCTGAGGC CCTGATTGGT GCCTATTATG TAAGTGGTGG ATTGACTGCT TCTCTCCATA TGATGAAATG GCTCGGTGTT AATGTTGATT TTGACCCAAA CCTAGTCGTT GAAGCCATCA GTAGAGTTTC TCTACGGTGT TACATCCCTA AAGACGATGA GCTCACAGAG TTGGAGAGAA AGATCCAACA TGAATTCTCT GCAAAGTTCC TTTTAAAAGA GGCTATCACA CACTTCTCTG TTCATGAATC CTATTCATAC GAGAGATTGG AGTTTCTTGG CGATTCTGTA CTCGATTTTC TAATCACTCG TCATCTTTTT AACACCTACG AACAAACTGG GCCTGGAGAG ATGACCGATC TTCGTTCTGC ATGTGTAAAT AATGAAAATT TTGCGCAAGT TGCAGTGAAA AATAATCTGC ATATCCACCT TCAACGCTGT GCTACGGTTC TTGAGAATCA AATAAACGAG TATCTGATGT CCTTCCCAAA GCCAGATGAA ACTGGTAGAT CAATCCCTTC AATACAGGGC CCTAAGGCTC TTGGAGATGT GGTGGAGAGT ATCGCTGGAG CATTGCTGAT CGATACAAGG TTAGATCTCG ATCAAGTGTG GAGAGTCTTT GAGCCGTTGC TATCTCCACT TGTAACTCCA GATAAACTTC AGCTTCCTCC GTACCGGGAG CTCAATGAGC TATGCGACTC TCTTGGGTAT TTCTTCCGAG AGAAATGTTC AAATGATGGT GTCAAGGCAC AAGCCACGAT CCACTTGCAG CTGGACGATG TTCTTCTAAC TGGAGATGGA TCTGAACAGA CAAATAAACT GGCCTTGGGA AAAGCAGCTT CACATCTGCT TACGCAACTT GAGAAGAGAA ACATTTCACG TAAAATTTCG ATCGGGGATA ATCAAAGTTC CATGGATGTC AATCTTGCTT GCAATCATAG CGACAGAGAA ACTCCGACTT CAGATTCTAT TGAAATCCAG AGCATAGTGA TTCCAGTTAT TGGACCTATA AACATGAAGA AAGGCGGGCC TCGTGGAACT CTACATGAGT TCTGCAAGAA ACATCTCTGG CCAATGCCTA CTTTTGACAC CTCGGAAGAG AAATCCAGAA CTCCGTTTGA ATTCACAGAT GGCGATGAGA AGCGAACTAG CTTCAGCAGT TTCACATCGA CAATAACCCT AAGGATACCC AACCGTGGGG CTGTGATGTA TGCTGGAGAA GCCAGGCCTG ACAAGAAAAG TTCCTTCGAC TCTGCAGTCG TGGAATTGCT TTATGAGCTC GAGCGCCGCA AGATCGTCAC AATACAAAAG TAG |
| Length | 4593 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 9999095.. 10006204 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G43920.2 |
| Description | dicer-like 3 |
| TAIR curator summary | Encodes a ribonuclease III family protein that is required for endogenous RDR2-dependent siRNA (but not miRNA) formation. |
| Alias | [ATDCL3][DCL3][DICER-LIKE 3][dicer-like 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.31662 |
Ahg470078 | SEC7-like guanine nucleotide exchange family protein |
| 3.4641 |
Ahg490794 | Protein of unknown function (DUF3550/UPF0682) |
| 5.65685 |
Ahg486976 | Protein of unknown function (DUF3527) |
| 6.245 |
Ahg902166 | guanylate kinase 1 |
| 7.07107 |
Ahg949816 | dentin sialophosphoprotein-related |
| 11.4891 |
Ahg919857 | |
| 16.8819 |
Ahg948327 | cullin4 |
| 17.2916 |
Ahg484793 | ARID/BRIGHT DNA-binding domain-containing protein |
| 19.799 |
Ahg479342 | Complex I subunit NDUFS6 |
| 20.664 |
Ahg948169 | myb-like transcription factor family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|