Detail



ID : Ahg484793

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484793|fgenesh2_kg.5__785__AT3G43240.1
Sequence
TTGTTCTTCA GATTTTTCTA ATTTTAATCT TGTGTTTGTG ATCTTTTGTG ATGGGCCTCT CTCCTCCATT TAGGTTTCTC TTTTTCCAAT AGAAATCGTC TTCTTCTTTT TCTGGGTCTC GTCGATTTCT TCTCTACGAG TTCGAAATTA GGTTTTTTTT TTAGGGCTGA TTTGACTCGG ATTTATTCGA CACTAGTGGG TTCTTGACGA ACTTATTCGT TGAATTTTCT TTAGGGTTTC TTTGTGGAAT TGTTCTCTTT AGTTGTTTGA AGTTTGGTTA TGCTATTGAA TGATGTTTCA TGGACAAGGG TTTTCGAGAA ACCGTTGTAA TGTTGTGGCA GTTGTTTCTG GAGAGCTTTG CGATACTAAT AACCAGATAG ATGGAGCTCC TCATCAACAA CCTAAATACC CTTTTCCAGA TCTCTCTTCT TCAGGGAGAG TCAAGTTTCA GGTACTGAAT AATCCTACGC CTGAGGAGTT CCAGGTTGCT GTTAACTCTT CAGCAACGGA TTTTGTCTAC TTGCAAGGGG AGTATAGTGG AGATAGTGAT GAAGTTGGTC CCTTAGTGTT GGGATATACT GATTTTTCTA CTCCTGATGC CTTGGTTACT CTGTTTGGTT CCACATTACC AACAACGGTT TACCTTGAGC TCCCAAATGG TGAAGAATTG GCTCAAGCAC TCTACTCTAA GGGTGTTCAA TATGTTATTT ATTGGAAAGA TGTTTTCTCG AAATATGCAG CCTGCCATTT TCGCCATGCT CTGTTTTCAG TCATACAGAG TTCGTGCAGC GATACATGGG ATGTGTTCCA TGTTGCAGAA GCATCTTTCC GACTCTATTG TACTAGTGAC AATGCTGTCC TTCCTTCTAA CAGCAACCGT AAAATGAATT ATGAGATGGG ACCCTGCTTG CTGGGAGAAC CTCCAAAGAT TGATGTGGTT TCGCCGGAAG CTGATGAACT AGAAGAGGAA AATTCATTAG AGAGCCTCCC ATCAATAAAG ATATATGATG AAGATGTTAC CGTGAGGTTT CTTTTGTGTG GACCACCATG CACACTGGAT ACATTTTTAC TGGGATCGTT GGTGGATGGA CTTAATGCTC TCTTGAGAAT AGAAATGCGA GGAAGTAAGC TCCATAATCG TTCTAGTGCT CCAGCACCTC CTCTTCAAGC AGGAACATTT ACTCGTGGTG TAGTGACCAT GCGTTGTGAT GTCTCGACCT GTTCTTCAGC ACACATATCA ATGCTGGTGT CTGGAAATGC GCAGACCTGT TTCAGTGATC AGCTTTTGGA AAATCACATA AAACATGAGG TCGTTGAGAA GATCCAACTA GTCCATTCAG TGGGAAACTC AGAAGAAACA AAGCGGGGGT TCTCTGAGCC TCGGAGATCT GCCTCAATAG CTTGTGGGGC AAGTGTGTGT GAAGTTTCGA TGCAAGTCCC AACATGGGCT CTGCAGGTTT TAAGACAGCT GGCACCTGAT GTGTCATACC GCAGTTTAGT TGTCCTTGGA GTAGCAAGCA TTCAGGGGTT GTCTGTTGCT TCCTTTGAAA AAGATGATGC AGAACGTTTA CTTTTCTTCT GCGGACAACA GATCAATGAT ACTTCAAATC ATGATACTCT TCTATCCAAA ATTCCTCACT GGTTGACGCC TCCTTTGCCA ACCAGAAAAA GATCCGAACC ATGCAGAGAA AGTAAGGAAA TCGAAAACGG GGGACCTACA TCAAGGAAAA TCAACGTGGC TGCTTTGAGA CCAATACCTC ACACCCGTCG ACATAAGATG ATACCTTTCT CTGGTTACTC TGAAATTGGA AGATTTGATG GTGACCACAC CAAAGGAAGC TTGCCTATGC CTCCAAAGCA TGGTGCATCA GGAGGCACTC CGGTAACTCA CCGTAAAGCT TTTTCTGGTT CGTACCAGAG AAAGCAAATA ATCTCACTGA ACCCTCTGCC TCTCAAGAAA CACGACTGTG GAAGAGCGCA TATTCAAGTT TGCTCAGAGG AGGAGTTTCT GAGGGATGTG ATGCAGTTCC TGCTAATACG AGGACATAGC CGGCTTGTTC CTCCAGGGGG ACTTGCGGAG TTTCCGGATG CTGTTCTTAA CTCAAAGCGG CTTGATTTGT TCAATCTGTA CAGAGAGGTT GTATCACGGG GAGGGTTCCA CGTAGGGAAT GGGATCAACT GGAAGGGACA AGTTTTCTCG AAGATGCGGA ACCACACGCT CACAAACAGA ATGACTGGTG TGGGTAATAC CCTGAAAAGA CACTATGAGA CGTATCTACT GGAGTATGAA TATGCTCATG ATGATGTTGA TGGAGAGTGT TGTTTAATTT GTCGCAGTAG CACAGCGGGT GACTGGGTGA ACTGTGGATC ATGTGGAGAG TGGGCTCATT TCGGATGTGA CAGAAGGCCT GGCCTCGGCG CGTTCAAAGA TTATGCGAAA ACGGATGGGT TGGAATATGT GTGCCCAAAT TGTAGCGTCT CGAATTACAG GAAGAAGACT CCAAAGACGT CCAATGGCGG CTTGCTTGTA CCTTAGCTTT GTACCTTAGC TTCATGTTTC TTCTTTTGTT GTACTTTTTG CCTTGGAACC AAATGATTGA TTGATTCCTC TGATATTTCA CGAGTTTTTT TGC 
Length2633
Protein Sequence
Protein Residue
Map Locationscaffold_5: 9553723.. 9558740
Download Sequence
A.thaliana
AGI-codeAT3G43240.1
DescriptionARID/BRIGHT DNA-binding domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.65685 Ahg482885 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
6.32456 Ahg483630 structural constituent of nuclear pore
8.83176 Ahg332329 ABC transporter family protein
9.16515 Ahg891152 aconitase 3
12.6491 Ahg489866 light-mediated development protein 1 / deetiolated1 (DET1)
13.784 Ahg320449 regulatory particle non-ATPase 13
13.8564 Ahg490357 ARM repeat superfamily protein
15.1658 Ahg937567 aldehyde dehydrogenase 10A9
15.1987 Ahg933191
15.4919 Ahg314555 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression