| Annotation |
|---|
| Description | jgi|Araly1|485153|fgenesh2_kg.5__1145__AT3G47890.1 |
| Sequence |
ATGGGTCAGA AGAAGAAAGC CCCCGCGCCG TTGGATTCGG CTGTGATCAA GCTCGAATGC GAGAAGGCAC TCAAGTCATT CGGGCGGGGG AGCTACAACA AGGCGATTCG TCTGATAAAG GATTCATGCT CTCGTCATCA AGACTCTGCC CTAATCCACC GTGTTCAAGG AACTATCTGC GTCAAGGTTG CTGCTGTCTA CGAGGATCTA GCTACGAAAC ACAAGTATCT CCGGAATGCA ATTGAATCTG CTAGAAAAGC TGTGGAGTTG TCTCCGAATT CGATTGAGTT TGGGCATTTT TATGCCAACT TGCTTTATGA GGCTGCTAAT GATGGGAAGA GAGAGTATGA CGAAGTTGTG CAAGAGTGTC AACGTGCTCT CTCTATCGAA AATCCGATTG ATCCTGCTAA AGAGAGTTTG CATGATGAGA CTCAGTTGAA GATATTGACA CCTGAGGCTC GTATTGTTCA TGTGCAGGAT GAGCTCAGGT CACTGATACA GAAATCTAAC ATTGGTTCAT TGTCTACTTG GATGAATAAT CTGGGAAAAG GTGAAGAAAA GTTTCGGTTG ATACCGATTA GGAGAATGGC TGAGGATCCT ATTGAGAGTA ACTTGATTCA GACCAGGAGG CCTAATGAGA TTAAAAAAGC TAACAAAACT ATTGAAGAGA TAAGGAAGGA GGTTGAAGTT AGGGTAGCTG CAGCTAGGTT GTTGCAGCAG AAGTCAGAAT CTTCCCCGTT GGAAAATGTA GGAGCTGTTG GCAACAAGGG ATCAGATCCA ACTTTAGGTT CGGGGAAGAG AAGCGGAGAG AGGAGAAAGC ATGGAAGTGC AAGGAAAAAC GGCTCCACAG CGGATAGAAG GGATCGGGTT AGGTCATACT GGGATTCTAT GAGCAAAGAA ATGAAGAAAC AATTGCTTAG AGTTAAGGTT AGTGATCTTA CGAGTCACTT TAGTGCTTCA AAGGATGGGA ATGCAAATGA GATTATAAGT GAAGCTCTGT CCTTTTGTGA GGCCAATAAG ACTTGGAGGT TCTGGGTTTG CTGCCGGTGT AGTGAAAAGT TCATAAAGTC TGAGGCTCAT ATGCATCATA TTGTGCAGGA GCACATGGGT AATGTCTTAC CTAAGATGCA AATGGTTCTG CCTCAAAGTG TCGACACTGA GAGGATTGAT ATGCTTCTTA CTTCCCCATG GAAACCATTG GATCTCTCTG CTGCGATGAA ATTGCTTCGC GGTCAGCAGA AAATCCAAAA TTCTGAGTTT GATAAATTTC ACTCTGGAGA TAATATGGAT GACGGTGACG ATTGCTTCAC GGATGCACGG AATGATACTT CACCAGAGAA AGAAAGCCTT GGATACACTT GCAACGGTTG TAATGAGAAT GAACAAGAAG AGGTTAAGCT GTCGATCGCA TTTCCTCCTC CTGATGGCTG GCCTATATCT GATGATCCTG AACGTGCAAA GCTCCTTGAA AAAATCCGTG CAGCCTTTGA GCTGCTTATT AGACACAAAT ACTTAGCTGC CAGCCATCAT GATAAGGTGA TACAATTTAC GCTGGATGAA CTTCAGAATC TAGCTTCGGT TTCACAATTC TTAAGTCGTA GCTTGAACCA GTCACCCATA TGCATCTGCT TTTTGGGAGC TTCCCAGCTC AGGAAAATTC TCATATTCCT GCAAGACTTG ACTCAGGCCT GTGGATTGAA TCAATATTCT GAACAAAGTA ACTCCAATGA TGAAATTAAT TCTGGCGACC TGAGTCGTGA AGTTACAGAG GAGATTCTTC TTGATGGTGA AGATTCATGT CTTCTTTTGG ATGAAAAAGT ACTTGGCACT GAGTGCATCC AAGAGAAATA TATGGTCTCA GCATTTGATA ATGTAGCTAT AGTAAGTTCT GGAGATATTG CTAACGGCAA TAATGTGTCT TCTGGTGCGG ATGGATTTCT TTCATGGATC TTTGCAGGAC CCTCTACCGG GGAACAAGTT GTGTCATGGA TGTGCACAAA GGAAGAGAAA ACAAATCAAG GACTGGAGAT CATGCAGCAT CTTGAGAAGG AGTTCTATCA CTTACAGAAC CTCTGCGAGA GAAAATGCGA GCACTTAAGC TACGAGGGAG CACTGCAGAC TGTTGAGGAC CTTTGTCTTG AAGAAGCCCG GAAGAGGGAG ACTTCAGCAG AGTTTACCCA TGAAAGTTAT GAATCTTTGC TGAGGAAACG AAGACAAGAG CTAAATGAGA ATGACCTTGA GTTGGTGTTT ATCAGTAGTA GGTTTGAGTT AGATGCTATA ACAAATGTTT TGAAAGATGC TGAAACCCTC AACCACAATC AATTTGGATA TGAAGAATCA TATGGCTGCA CGAGTTCTCA GCTACGTGAT CTGGAATCTG GTGAAGCTGA TGAATGGGGG ATGAAAGATT CCTTACATGA GGCTGACAGT TTCATAGAGG TTGCGATCCA AAAACAAAAA GAGCAGCTGT CTGCAGAGCT TAGCAAAATC GATGCTCAAA TGATGCGGAA TGTCACTGGG ATGCAGCAAT TAGAACTAAA GCTTGGACCA GTTTCCTTCA ACGATTATCA GATAGTATTG TTACCTTTGG TGAAGTCCTA CATGCGGGCA CATTTGGAGG CGTTAGCAGA GAAAGATGCC ACTGAGAAGT CGGATGCTGC AAGAGAAGCG TTACTTGTTG AGCTCGCTCT TGATTCTAAG AAGGAGGCTC GAGGAAGAAA TGATAATTCA AAAAACACGC TGGAAAAGTC CAAGGACAAG AAAAAGATTA AAGACACTAG GAAACTGAAG GATTTGAAGG CTACTATTGG AAACGACCAT CGCTTCAATG TTGACTCAAT TGAACACAGC CTCCCTTCGG TTGCATCTTT TGTTGATCAT TCAGAGGCTG ACGTTGTTTC TGAAGCCGTT GAAGCGTTAA AAGATGAGGA AGAGGAATAC AGACGCCGTA TCGAGTTAGA GGAAGAGGAG AGGAAGCTTG AAAAAACTCT AGAGTATCAA AGAAGAATTG AGAATGAAGC TAAGGAGAAG CACATCGCCG AACAAAAAAA GAAATACAGC TGTTTACATC CGATGAATGT GACAGAGGCA GTGTATGATG ATTGCATAGA AAAATTCTTT GATGATGTAG ATTTACAAGA ACAAGAAAAA TCCATAAATC AGGAGAAAAG GAATGGACAA CTTGATGACT TGGAAGGAGC CAAAGTGAAT ATAAATTGTG TTTTCCCGTC AACAAATCAT TGTGTGATAT CTGATACTGG AAAGGTGCAG GATGTAAAAT CCCAAGAAGT AGTGCCTAAC GGTATAGCTA TTCAATCTGG TGTTTTCCAA TCTGATCAAC GCCCTGGGAG GAGGGGTAGA CGCCAAAAAG GTTCAAACAA GTTGGTTGAT GGAAAATATC AGGTCATACC TTCTGAGAGC GAGGATAGTA AATCTCAGAG GTCAGGCACC GTAAGTGAGA GACAATCTGA AATTCTACGT AGCAATGGTG ATGCGGGAAT AAAGACATTA AGACAATTAC AAGCTGAAGA CGATGAAGAA GAAAGATTTC AAGCTGACCT TAAAAGGGCA GTGCTTCAAA GCCTTGATGT GTACCGAGGA GGTAGAAATA TGACATCATG TTTGAGGACA TCTCTGGAAG ACAACAATGA TTGGGTTTTA TCTGATGTCA CAAAGGAATC TCAGAGTTCG CCCGGAGTTG CCATATTTGG CACAGGTCTT CAGAATGAAG TTGGCGAATA CAATTGCTTT TTAAATGTTA TCATACAGTC TCTATGGAAT CTGGGGCTGT TTCGAGCTGA GTTCTTGCGG AGTTCAACAC TAGAGCACCA TCACGTTGGA GATCCTTGTG TTGTCTGCTC ATTGTATGAG ATTTTTACTG CTTTAAGTGC TGCTACGAGT GAAACACGAA AAGAACCTGT GGCTCCTTCA TCTCTCAGGA TTGCTTTGAG TAACTTGTAT CCAGATAGCA GTTTCTTCCA AGAGGCTCAG ATGAATGATG CTTCAGAAGT ATTGGCCGTA ATCTTCGAAT GCCTTCATCG CTCATTTGCT CAAAGTTCAA GCGTGTCTGA CACAGAATCT ACTGAGAGCA ACAGTACTGG TTCATGGGAC TGTGCCAATC GCTCATGTAT TGCCCATTCT CTGTTTGGAA TGGATATTTT TGAGCAATTG AATTGCTACA GCTGTGGGCT GGAGTCCAGG CATTTGAAAT ACACATCCTT TTTCCATAAC ATCAATGCTA GTGCCCTACG CACCATGAAG GTTACATGCG CTGAAAATTC ATTTGATGAA CTTCTAAATC TTGTCGAGAT GAACCATCAA CTAGCTTGTG ATCCCGAAGC TGGTGGGTGT GGGAAACCAA ACCATATCCA CCACATTCTC ACCACTCCAC CACATGTTTT TACTATAGTT TTAGGGTGGC AAAACACATG TGAGACTGTA GAAGACATAG CAGCTACCCT TGCAGCCTTG AATACCGAGA TAGATATCAG CATCATGTAC CGTGGTCTGG ACCCTAAGAG CACATATAGC TTAGTTTCCG TGGTTTGTTA TTATGGACAG CATTATCATT GTTTTGCACA TAGTAATGAG CACGATCGGT GGATCATGTA CAATGACCAA ACAGTCAAGG TTATCGGTAG CTGGAGTGAT GTACTTTCTA TGTGTGAGAG AGGACATTTG CAACCACAGG TTCTTCTCTA CAAAAAGAAA CTTTAAATCA GAAAACAAAA GAAAAAACAG AGCAAGTAGA GTTACGTTGC AACAGTTTTG GAGATCTCCC AAGTACAAAC TGCAAAGAAA GTAAGTACTA TTTTTTGATA ATCGAAAACT CAGAGAGGAA GGAATGTGAT TTTTACTCAT CTCAGTAGTT CAAAGAGGAT GGGGAAGAAG ATTAGAGGTT TTAGAAGATG TCATATAGTT |
| Length | 4920 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 12860428.. 12867101 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G47890.1 |
| Description | Ubiquitin carboxyl-terminal hydrolase-related protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3 |
Ahg311407 | Beige/BEACH domain ;WD domain, G-beta repeat protein |
| 4.47214 |
Ahg904083 | Cleavage and polyadenylation specificity factor (CPSF) A subunit protein |
| 5.19615 |
Ahg321506 | vacuoleless1 (VCL1) |
| 9.53939 |
Ahg913933 | |
| 9.79796 |
Ahg490606 | |
| 14.0712 |
Ahg479648 | dentin sialophosphoprotein-related |
| 14.1421 |
Ahg897087 | HOPM interactor 7 |
| 18.1659 |
Ahg942029 | Protein of unknown function (DUF1162) |
| 21.6564 |
Ahg482837 | AMP deaminase, putative / myoadenylate deaminase, putative |
| 25.6125 |
Ahg470391 | Transducin family protein / WD-40 repeat family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|