Detail



ID : Ahg485538

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485538|fgenesh2_kg.5__1530__AT3G51830.1
Sequence
TTTCTCCTGA TCCAGTTATT GATTGAACAA ACTCCAACAA CATTCATCAT CATCCTTCAA ATTTTGGAAA ATTTATTTGA AAATCTCAGA ATTTGCGTTA ATGGAGATCG TTCCATCTTC AAGTAGATTC AAGCTCTACG ATCAATTCGA GCTTCTAGAG TTTCCTGACA AGTACGTCGT CAAACCCATC GAATCGCCTG AGGAAGGCTT CTCCGTCGAT CGGCGCGATG GCAACATCAA ACCTCTTGAT GAAAACGCAT CTTCTGGGAA TCCTACTAAA GTCTCTACTA TATATGGCGT AGGAGGAACT ATTAGGCTCT TAGCAGGAAC ATACTTGCTA GTTGTAACGT CTCGGGAAGA AGTTGGGAAT TTTCTCGGTT TTCCGATTTT TAGAGTTACG GCTATGAATT TTCTACCTTG CAATGAGGCT GTGAGGTTTG CTACTGCTCA AGAAAAAAAG GACGAAACAT ATTTTAGGAC TCTGTTACAA GCACTTGAGA CAACCCCTGG ATTGTATTTT TCATATGAAA CTGATCTTAC ATTAAACCTG CAAAGAAGGT GCAAGCTAGC TGAAGGTTGG AAGCGTAAGC CTATGTGGAA GCAGGCTGAC CCTCGATATG TTTGGAACTG GCATCTTCTG GAGGAGTTAA TTGAATGCAA ACTGGATGGT TTTATTATTC CTCTACTTCA AGGAAATATC CTTTTCTTTA TCTTCTTTAT CTTCTGCTTA AGCTACCAAG TTGCTGAGCT AAAGCTCAAG AATTCTCCTG CTGTGATATC GATAATTTCC AGGCGCTGTA CACGACGTCT AGGTACACGT ATGTGGAGAA GAGGAGCCAA TCTTGAAGGG GACGCTGCTA ATTTTGTCGA ATCTGAACAA ATAGTGGAGA TTAATGGTTT CAAGTTCTCA TTATTGCAGG TTCGAGGTTC AATCCCACTT ATTTGGGAGC AGATCGTTGA TTTGAGCTAT AAGCCAGGGC TTAAGATAAA TAAGCATGAA GAGACGCCAA AAGTTGTACA GCGCCATTTC CATGATCTTT GCCAAAGATA TGGAGAAATT ATTGCAGTTG ACCTAACAGA TCAGCATGGA GATGAAGGTG AATTAAGCAA AGCATATGCC ACTGAAATGG AGAAGCTTCC AGATGTGAGA TATGTCTCCT TTGACTTCCA TCAAATCTGT GGAACTACAA ACTTTGACAA CCTGAGGGTA CTGTATGAGC AGATTGGGGA TGAATTTGAA AAGCAAGGAT ATTTCCTTGT AGACGCAGAC GAGAACATCC TAGAAGAGCA GAAAGGAGTT ATCAGATCTA ACTGCATCGA CTGTCTTGAC CGCACAAATG TTACCCAGAG TTACATGGGC CAGAAAAGTG TGAATCTACA ACTTCAAAGG ATCGAAGTGT TTGATTCCAC AGATTGTATA TCCACGTTTG AAGATGATTA CACAAAGTTC AGAACAATTT GGGCTGAGCA AGGGGACGAA GTTAGTTTGC AATATGCCGG GACCTATGCT CTTAAGGGCG ACCTCGTAAG GTACGGGAAG CAGACTATGA CTGGAGCCAT CAAAGATGGT CTCAGTGCGA TGTCGAGATA TTATCTGAAT AATTTCCAAG ATGGTGATGC TTTGGATCTC ATAAGTGGTC GCTACACAGT GGGCACTCAC AGCCCTTCAC AACTCCAGCC CATTGGATCA CAACCGTCTT TTCTGCCGGT AGCATCAGCA TTGTTGATAG GTGGTGTAAC AGTGACATCT TTCACAATTC ATCAAGCGGG AAGAAACACG CAGCAGTATC TGGCGTCAGC ATTGTGGGCT GGAGTGACTG CAGGAGTTGT GGCAATGATC AAAGCCAATG GAAGGCACTT GTGTTCAAGG CCTCGTCTTT GCCATCTCAT TTGATTAATA TTATTTGAGA TTCTCTGTGT CTCACATTCT TCCCAAAACC CACGCCCACT GTCCCTCTTT TCAACGTCCG CACAAAAAAA TTCGAACTAA AAGTCCATAG TACTGAACTT CTTTAGTTCT ATAAACCAAA ATAATATAA 
Length2039
Protein Sequence
Protein Residue
Map Locationscaffold_5: 14940467.. 14945749
Download Sequence
A.thaliana
AGI-codeAT3G51830.1
DescriptionSAC domain-containing protein 8
TAIR curator summaryputative transmembrane protein G5p (AtG5) mRNA, complete
Alias[ATG5][SAC8][SAC domain-containing protein 8]
Gene coexpression
MR
MR Locus Description
8.18535 Ahg896860 glycine-rich protein
9.11043 Ahg917635 Neutral/alkaline non-lysosomal ceramidase
12.6886 Ahg329973 Protein phosphatase 2A regulatory B subunit family protein
17.5784 Ahg488536 SART-1 family
20.347 Ahg344464 Structural maintenance of chromosomes (SMC) family protein
22.3159 Ahg942557 isoamylase 3
28.9828 Ahg945962 calcium-dependent protein kinase 15
30.0998 Ahg486235 Cysteine proteinases superfamily protein
30.3974 Ahg484347 Protein kinase superfamily protein
31.9844 Ahg481213 Cyclin-dependent kinase inhibitor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression