Detail



ID : Ahg486680

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486680|fgenesh2_kg.5__2672__AT3G61790.1
Sequence
TCTCTCTAAC ACAGCCGCCT TTGTGACCGT CCGATTTTAA ATCAGCGTTT CCGGTTCATT TGACGGCAAC TCTCTCTCTC TCTCTCTCTA GAATTGATGA AGAAAAGCAT CTATCTTTTT TGTTTTTGAA AATCAACAAC ACTTCACGAG GGTTGACCTG TTTCGGTGGT GTTTCTTCAA TTCATCCCGA ATTTTGATAT TTCGTTTCGA TCGAAGATCA ATCAAAGTTT CCACCTTTCT TCAATGGATT TGGATAGCAT GGACTGTACA TCCACCGTGG ATGTGACTGA TGATGAAGAG ATCCACCAAG ATCGCCATTC CTACGCTTCT GTTTCCAAGC ATCATACTAA TCACACCAAC CTGAATGCTG CTGCTTCTGG GCTTCTCCCG ACCACCACCA GTGTTCATGA GCTTCTCGAA TGTCCTGTCT GCACCAATTC TATGTACCCT CCCATTCATC AGTGTCACAA TGGTCATACT CTGTGTTCAA CCTGTAAAAA CAGGGTTCAC AACCGCTGCC CAACTTGTAG ACAAGAGCTC GGTGATATCC GTTGTTTGGC TCTGGAAAAA GTAGCCGAAT CACTTGAACT ACCGTGTAAA CACATGTCAC TTGGATGTCC TGAAATCTTC CCTTATTACA GTAAGCTCAA ACATGAGACT GTATGTAACT TCAGGCCTTA TAACTGTCCG TATGCTGGAT CCGAGTGTTC TGTTACAGGC GATATACCTT TCTTAGTTGC TCATCTGAGG GATGATCATA AGGTGGATAT GCATTCTGGG TGTACTTTCA ACCATCGTTA TGTCAAGTCT AATCCTCGTG AAGTCGAAAA CGCCACATGG ATGTTAACTG TCTTTCATTG CTTCGGTCAA TACTTCTGTC TACACTTTGA GGCATTCCAG CTCGGAATGG CTCCAGTCTA CATGGCCTTT CTGCGTTTCA TGGGGGACGA GACAGAAGCG CGGAACTACA ATTACAGTTT AGAAGTGGGA GGTTATGGAC GGAAGCTGAT ATGGGAAGGA ACACCGAGAA GCGTAAGAGA CAGCCACAGG AAAGTTAGAG ACAGTCATGA TGGACTAATT ATACAAAGAA ACATGGCTCT CTTCTTCTCA GGTGGAGATA GGAAAGAGCT GAAACTTCGA GTCACTGGAA GGATCTGGAA AGAGCAACAA CAAAGTGGTG AAGGTGGAGG AGCTTGTATC CCAAACTTGT CTTGAAAATT TTTGAAAACC TCGCCGACTT GTCTCTGTTA ACCATGGTCA TCTGTAATTA GGGTTTTCTC TGACGATAAA CTTGGGTTGT TCTTATGTAC CTCTCTCTGT CTTTCTCTTT CTCATGTCAT GGAGGTTTTT TTTTT 
Length1355
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19376218.. 19378315
Download Sequence
A.thaliana
AGI-codeAT3G61790.1
DescriptionProtein with RING/U-box and TRAF-like domains
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6 Ahg477381 SIN3-like 1
7.74597 Ahg496782
15.2971 Ahg492147 D6 protein kinase like 1
22.1811 Ahg482295 hydroxyproline-rich glycoprotein family protein
22.6274 Ahg470649 acyl-CoA oxidase 3
24.4949 Ahg941041 PHD finger family protein
26.7208 Ahg472436 serine hydroxymethyltransferase 6
32.0312 Ahg485566 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
33.1964 Ahg939686 Phosphatidic acid phosphatase (PAP2) family protein
34.0147 Ahg470898 decapping 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression