| Annotation |
|---|
| Description | jgi|Araly1|485698|fgenesh2_kg.5__1690__AT3G53230.1 |
| Sequence |
CACTTCTCGA ATCTTCTTCT TCTTCTCTGC GAAGCTCTCT CTATAATATC AAACATGGCG AATCAAGCTG AATCATCCGA CTCGAAGGGG ACGAAGAGGG ATTTTAGCAC CGCGATTCTG GAGCGAAAGA AGGCGGCGAA TCGTTTGGTT GTGGATGAGG CGATTAACGA TGATAACTCT GTCGTTTCTC TTCACCCTGA AACCATGGAG AAGCTACAGC TTTTTCGTGG TGATACCGTT TTGATTAAGG GAAAGAAGAG GAAGGATACT GTGTGTATAG CTTTAGCTGA TGATACTTGT GATGAACCAA AAATTAGGAT GAACAAGGTT GTTAGGTCTA ACCTCAGGGT TAGGCTTGGA GATGTTATCT CTGTTCATCA ATGTCCTGAT GTCAAGTATG GGAAGCGTGT TCACATCTTG CCTATAGATG ATACCATTGA AGGAGTTAGT GGCAATATAT TTGATGCATA CCTTAAACCT TATTTCTTGG AGGCATACCG TCCGGTGAGG AAGGGTGATC TTTTCTTGGT TAGAGGAGGG ATGAGAAGTA TTGAGTTTAA GGTTATTGAG ACCGATCCTG CTGAGTACTG TGTGGTTGCT CCAGATACAG AAATTTTCTG TGAGGGTGAA CCGATAAAGA GAGAGGATGA GGAGAGGTTG GATGAAGTTG GGTATGATGA TGTTGGTGGT GTCAGGAAAC AAATGGCTCA GATTCGGGAA CTTGTTGAGC TCCCATTGAG GCATCCACAA CTCTTCAAGT CCATTGGTGT GAAACCTCCC AAAGGAATCT TGCTATATGG TCCCCCTGGT TCTGGAAAGA CACTGATTGC CCGTGCTGTT GCTAATGAGA CTGGTGCATT TTTCTTCTGT ATCAATGGTC CCGAGATCAT GTCGAAGCTA GCTGGTGAGA GTGAAAGCAA CCTCAGGAAA GCGTTTGAGG AAGCTGAGAA GAATGCCCCC TCAATCATCT TTATTGATGA GCTCGATTCG ATTGCTCCAA AAAGAGAAAA GACACACGGG GAAGTTGAAA GACGTATTGT ATCCCAGCTC TTGACACTTA TGGATGGGCT TAAATCCAGA GCCCATGTCA TTGTTATGGG AGCGACCAAC CGTCCCAACA GCATTGACCC CGCTTTGAGA AGGTTTGGAC GATTTGACAG AGAGATTGAT ATTGGTGTTC CTGATGAGAT TGGTCGTCTT GAAGTTCTCA GGATTCACAC CAAGAACATG AAGCTTGCGG AAGATGTTGA TTTGGAAAGA GTATCCAAAG ACACCCATGG TTATGTTGGT GCTGATCTTG CAGCATTATG CACTGAAGCT GCTCTCCAAT GCATTAGGGA GAAGATGGAC GTAATTGACC TAGATGACGA GGAGATAGAT GCTGAAATTC TCAATTCTAT GGCTGTGACT AATGATCATT TCCAGACTGC CCTTGGTAAC AGCAATCCTT CAGCTCTACG TGAGACGGTC GTTGAGGTGC CTAATGTTTC TTGGGAGGAC ATCGGTGGTC TTGAGAATGT CAAGAGGGAG CTCCAAGAGA CTGTTCAATA TCCAGTGGAG CATCCTGAGA AATTCGAGAA GTTTGGGATG TCACCGTCTA AAGGAGTCCT ATTCTATGGT CCCCCTGGTT GTGGAAAGAC CCTCTTGGCT AAGGCTATTG CGAACGAGTG TCAAGCCAAC TTCATTAGTA TCAAAGGTCC TGAGCTCCTC ACAATGTGGT TTGGAGAGAG TGAAGCCAAT GTGAGAGAGA TATTCGACAA GGCACGCCAG TCTGCTCCGT GTGTTCTTTT CTTTGATGAG CTTGACTCCA TCGCCACTCA GAGAGGGAAC AGTGTTGGAG ATGCTGGTGG TGCAGCAGAT AGAGTATTGA ACCAGCTTCT TACAGAGATG GATGGAATGA ATGCTAAGAA GACGGTCTTC ATCATCGGAG CTACAAACAG ACCAGACATC ATCGACCCTG CACTTCTGCG TCCTGGTCGT CTCGATCAGC TCATCTATAT TCCTCTTCCT GATGAGGAGT CTCGTTACCA GATCTTCAAG TCTTGCTTGA GGAAATCCCC TGTGGCTAAA GATGTTGACC TTAGGGCTCT TGCGAAGTAC ACCCAAGGCT TCAGCGGTGC AGACATCACA GAGATTTGCC AGCGTTCTTG CAAGTATGCG ATCAGAGAAA ACATCGAGAA GGATATTGAG AAGGAGAGGA AGAGAGCAGA GTCGCCAGAA GCAATGGAAG AGGACGAGGA GGAGATTGCA GAGATTAAAG CTGGTCACTT TGAGGAATCC ATGAAATATG CAAGGAGATC AGTAAGTGAT GCAGACATTC GCAAGTATCA GGCTTTTGCT CAGACTCTAC AGCAATCACG TGGGTTTGGA AGCGAGTTCA GGTTCCCAGA TGCGCCGACA GGGACTGGAG CTGCTGCCAC AGTCGGGGGA GTCGACCCGT TTGCCACATC CGGAGGAGCA GCCGACGATG ATGATCTCTA CAGTTGAAAG ATCTGATCAG ACCCTGTGAC TACTGTCTTT AGTCTTTTAC TTTGTTCTGC TTGAAAAACT TTTGATGGTC TTTGTTGTGT TTTATTTATA AGTCTTTTGT ACATAATCGT TGTGATGAAA TAAATCTAGA GAAATGAGA |
| Length | 2629 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 15581588.. 15585202 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G53230.1 |
| Description | ATPase, AAA-type, CDC48 protein |
| TAIR curator summary | |
| Alias | [AtCDC48B][cell division cycle 48B] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.48074 |
Ahg950508 | temperature-induced lipocalin |
| 8.12404 |
Ahg490342 | sucrose synthase 3 |
| 8.83176 |
Ahg903921 | SERINE CARBOXYPEPTIDASE-LIKE 49 |
| 9.64365 |
Ahg945747 | VIRB2-interacting protein 1 |
| 10.0995 |
Ahg491272 | abscisic acid responsive elements-binding factor 3 |
| 10.9545 |
Ahg924738 | flavin-monooxygenase glucosinolate S-oxygenase 4 |
| 11.6189 |
Ahg489982 | glutathione peroxidase 6 |
| 11.7473 |
Ahg333508 | Late embryogenesis abundant protein |
| 13.4907 |
Ahg938922 | glucan synthase-like 11 |
| 16 |
Ahg926743 | alpha dioxygenase |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|