Detail



ID : Ahg485760

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485760|fgenesh2_kg.5__1752__AT3G53710.1
Sequence
CACAAGTCTG CGAGATTTGG ATCAGATCTG CTTCAGGTTG GATTGATTGG TGATCAGAGC TCCGGGAAAC ATGGCGGCGG CGAGACAATT ACGCACTCTC CAATCTCAAC CTGAAAACAA GGTATGTGTC GACTGCGCTC AGAAGAATCC TCAATGGGCG TCGGTTTCTT ACGGAATCTT CATGTGTTTG GAATGCTCCG GGAAACACCG AGGCTTAGGC GTTCACATCT CCTTCGTCAG ATCCGTAACC ATGGATTCAT GGTCTGAGAT CCAGATCAAG AAAATGGAAG CTGGAGGCAA CGAACGACTC AACAAATTCT TCGCGCAATA CGGAATCTCT AAAGAGACTG ATATCATTTC AAAGTACAAT TCGAATGCTG CTTCTGTGTA TCGTGACCGG ATCCAAGCTT TAGCTGAAGG TAGGCCATGG AATGATCCGC CAGTTGTTAA GGAAGCGAAT AAGAAGCCTC CGTTGGCTCA GGGCGGTTAT GGAAACAACA ACAACAACAA CAATGGAGGA TGGGATAGTT GGGATAACGA TGATTCTTAC AAATCTTCAA CTGATATGAG ACGGAATCAA TCAGCGAATG ATTTTAGGGC ATCGGGAACT AGAGGAGGTG CACATGTGAA GTCAAAGTCG TCGTCGGATA TCTACACGCG ATCCGAGCTG GAGGCTTCTG CTGCGGGGAA AGAGAGCTTC TTCGCGAGGA GAATGGCGGA GAATGAGTCT AAGCCTGAAG GTCTTCCTCC TTCGCAAGGC GGTAAGTATG TAGGATTCGG ATCAAGCTCC GCTCCACCAC CGAGAAATAA TCAACAGGAT GATGTTTTCT CCGTTGTTTC TCAGGGTTTT GGAAGACTGT CTCTGGTTGC TGCATCTGCA GCTCAGTCAG CTGCAAGTGT TGTTCAAACA GGAACCAAGG AGTTCACATC CAAGGTGAAG GAAGGTGGGT ATGATCACAA GGTGAGTGAA ACTGTAAATG TAGTTGCTAA TAAGACAACA GAGATAGGAC ATAGGACATG GGGGATCATG AAAGGAGTAA TGGCAATGGC GACACAGAAG GTAGAAGAGT TCACTAAAGA AGGAACAACA AGCTGGAATC AGCAGAGTGA AAGTGAGGGC AATGGTTACT ACCAGAACTT TGGAAACGGG AACAAAGCAG CGAATTCATC TGTTGGAGGA GGAAGGTCAC AATCATCAAC AAGTGGTCAT TACAACAATT CGCAGAATTC AAATTCTTGG GATAGCTGGG GAGAGAATGA GAATAAGAAG ACAGAAGCAG CAGCTCCAAA GGGGTCATCT GCTTCTAATG ATGATGATGG CTGGACTGGT TGGGATGATC ATGATGCCAA AGATGATGGG TTCGATGGCC ATTACCAAAG TGCAGGCGAT AAGAAATCTG TTGGTCACAA CGAGAAATCA GACACCGCTT GGACCGGTGG AGGTTTTCTC TAAGGGTGTT TCAGAATCCC CGTGAGAAGT GTATAATTAA TTAAGGCCGG GACCGTCGTG GTCTGAATAG AAGATGAGAT TGGTCTTCAT CTTAAAACCA TGTTCATCCA TACCCACAGG TCTGCGTTTT TCTTCATAAG TTGGCAGTTT CTTGATAATT TTTTCTTCAT GTGTTAAGGA GTAACATATT TGTACAAGAT CCATAGCCGA TTGTTTGCTA AAGATTTTCG GTTTTAGTCT TTCACAGTTT GAATTTATCT TCAACTGTAA TCACAACTGA ACATTCTTTT TCTCAAAATT GGCTTACTTG TTGGTAGCGT GATAATGT 
Length1778
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15786993.. 15789306
Download Sequence
A.thaliana
AGI-codeAT3G53710.1
DescriptionARF-GAP domain 6
TAIR curator summaryA member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.
Alias[AGD6][ARF-GAP domain 6]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg924173 hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
31.4325 Ahg497146 Endomembrane protein 70 protein family
38.6135 Ahg475389 FAD/NAD(P)-binding oxidoreductase family protein
42.3202 Ahg934076 tubulin beta-9 chain
52.8204 Ahg941120 sister chromatid cohesion 1 protein 4
58.7112 Ahg343889 Leucine-rich repeat protein kinase family protein
59.4643 Ahg489258 Protein of unknown function (DUF819)
82.0731 Ahg487993 catalytics
82.1949 Ahg478006 multifunctional protein 2
88.2496 Ahg483257 villin 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression