Detail



ID : Ahg486108

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486108|fgenesh2_kg.5__2100__AT3G56680.1
Sequence
AAAGAAGGAA AAAATATAAA GTTTCCTTTC CCTCTCGTTT GCTTTGGCTT CCCGAGAGAG AGAGATAAGA TTTGGTTAGC ATTCCTCTTG TCTCTCGCCG CTCTCAATAT GCTCCGATTT CGATTCTCAT CTTCCTCTTG ATTTGTCTTC TTCTTCTCTT TGCTGCGGAG AGATTTAAGC AAGAGACGCG GCGAGGAAGC TATCCATAAC TCTCTAGAAA CATCCATTCC CTTTTCTCAT GGACGCAGCG TTGCCGGAAA CCGCCGTCGG TACCGGTGGT ATGGTTATCG GAGATAGTGG ATTGAATGTA GATCCTTTTC TGGTTGAGGC TTTGCAGAAC TCTCGCCATC GTCTCACGAT TTTGCGGATG GAACTTGATG TTCAAAGGTT GTTGCAGAAC CCTGAACAGC AGCAGTTTGA GTTCCAGCAT TTTCCTACTT CGTATCTTCG TCTTGCAGCC CATCGTGTTG CTAACCATTA TGGACTAGCT ACAGCGGTTC AGGAAAGTGG TGCAGATGGA AATGAAAACA GAATCCTTGT GACAAAAACT ACAGAGAGCA AATTCCCTGC TCTTCGGTTG TCTGAAATCC CGGTGGCTAA ACAATCAGAA AATGGTAAGT TTGAGAGCAT GAAAGTTTCC ATCAAGACTC GACCTTCTAA AGGATCTGGA TATGGCGCTG GTGAACTGGA CAAGAAACGT GGTCCTCTTA GAAGTGTTGA AGAGAGGAAA GAAGAGTATG AAAGGGCTCG AGAACGCATA TTTAGTGGTC TTACAGGTCT TAATTGTGAT GACTCTTCAT CTGAAACTCA GGTGTATGGG AGGAATGCAA GTCTTCTTAG CAGAGATGAC AAGCAAGTTT CTAAGAATGC TTACGTTGAG GGCAAGAAGA ACTTAAGCCT CAGGGAAAGC GGTCCAACAT CTCGTGTTGC AATATTTAGA GACAGGGAGA AAGATCGGTT TGACCCTGAT TATGACCGCA GAAACGAAAG GTATATTAGG AGCCTTCCGG TGAATCAGAA CTTCAATTTA CCACCCTTCA ACATTCAGCA AATACCGACA CCATACTATG AAATGGGATT CACTGGATAT AACCAAATTC CAAGCACTCC TGCTCCTCTT GGCTTCGGGC CACCTCCAAG CTCTATCATG AGTCCCTATG GCAGCACAAT GGATGCAATG TATATGCATT GGCCTAATAC AGCTATGATG TATGCTCATC CGTATGAGCA GTTTAGGAAT GGCTCTCTTC AGGCACAGTT CGTTCAACAA CCCTTGAGCT TCGACTGTAT GCAGAACCGC TAGGTGCTTG TCTCGTTGTC AATCTTTATC TCTGTTTACC AGTTTTCTTG TAGAACTAGG AGCTGTTGTA ATGGAAATTT TGGAGTTGTA ATGTCAAATT TCAGAATGAA GATACCTTTT GTTCCTTTTA CACTTATCAG ATTCTGTCTG TTATTGATAC CAATGAACTA CTTTTGTGGG TCAAATCATC ATCGAAATTC TCTGTTTTGA ACTGAATGT 
Length1519
Protein Sequence
Protein Residue
Map Locationscaffold_5: 17028748.. 17031166
Download Sequence
A.thaliana
AGI-codeAT3G56680.1
DescriptionSingle-stranded nucleic acid binding R3H protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.48528 Ahg476621 plastid transcriptionally active 2
14.3527 Ahg489192 Fe superoxide dismutase 3
16.7033 Ahg893696 zinc finger (Ran-binding) family protein
19.3391 Ahg470715 translocon at the inner envelope membrane of chloroplasts 110
19.7484 Ahg496587 chromatin remodeling 24
20.9762 Ahg946627 pentatricopeptide (PPR) repeat-containing protein
28 Ahg928272 Tetratricopeptide repeat (TPR)-like superfamily protein
28.4605 Ahg950456 xylose isomerase family protein
30.0832 Ahg495469 Serine/threonine-protein kinase WNK (With No Lysine)-related
34.5254 Ahg489087
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression