| Annotation |
|---|
| Description | jgi|Araly1|486536|fgenesh2_kg.5__2528__AT3G60600.2 |
| Sequence |
TTTCTCGATC GACGACTGCT CTCTCTGAAC CGGAGACGGC GTCACGGGAC GAATCTAATC GCCGGGAAAC TGTTGTTTAT TCTTTTTGTC GTTTTTTTTT GGAAAATCGA ATTGAATCTC CGATGAGTAA CAGCGAGCTT CTCACCGTGG AGCCTCTCGA TCTTCAATTC CCTTTTGAAT TGAAGAAGCA GATCTCTTGC TCTCTGTATT TGACGAACAA GACCGACAAT AATGTTGCCT TTAAGGTTAA GACTACGAAT CCGAAAAAGT ATTGTGTTAG GCCTAACACT GGAGTTGTTC TTCCCAGGTC TACTTGTGAA GTTCTTGTGA CCATGCAAGC TCAAAAGGAA GCTCCTTCAG ATATGCAGTG CAAGGACAAG TTTCTGCTCC AAGGTGTGAT AGCTAGTCCT GGTGTCACAG CCAAGGAAGT TACTCCTGAG ATGTTTAGCA AAGAGGCTGG ACATCTAGTT GAGGAAACTA AACTGAGAGT TACTTATGTT GCTCCACCAC GACCACCATC ACCGGTTCAC GAAGGATCTG AAGAGGGTTC TTCACCCAGG GCTTCTGTCT CAGATAATGG ACATGGTTCT GAGTTTTCTG TAATGCTCTG TTTCAGAGAT TTAGCGTGGA CAGGGCTGAA CCGCAAGAAA ACACATCTGA GGTATTTTTC ACAATTCTTC CAAGTTTGTA ACCGTCAAAA TCATGTGAAA TCATCTTTTG CTTTTGCTCT GTTTAAAACT GATGCGTTGC TACTTTGGAG GTTGAGAATC TTTCTTTATG TTGATTACTT AAAAGGTTCA TTACATTTTG AGAACCATGT CCAGAGCTCA TTTATCTTTT TGTGCACCAA ATCCTCATTC TACAATATTT CCATTACAGC TAAATTTTGT GTGATTTCAG GCGAGGGCTC TGATCACCAA GCTAACCGAA GAAAAACAGT CTGCCATTCA ACTGAACAAC AGACTTCAAA GAGAACTGGA TCAGTTAAGG CGTGAAAGCA AGAAGAGCCA AAGTGGTGGT ATCCCATTCA TGTACGTTCT TCTGGTCGGA CTCATTGGTC TAATTTTGGG ATACATTATG AAGAGGACAT AAACCACCCA CCTGAATTTA ATCCCTCACC CGCCACGAAG GAAGAAAAAC AAAATAGACT TTTAACTCTT TTCAGTCGGA CATTTTTTTC TCTTCTGTAT TTGTCAATTT CGCCTTAAAA AGGTGTCCTA GAAGATTTGT GTTTCGTAAC TCAGTTTGCT TTGTTTTTTC AACTTTTGTA ATCCAAATGA CTTTGCGTTG GTTCTTTCTC CACTAATTCT |
| Length | 1310 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 18863110.. 18864369 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G60600.1 |
| Description | vesicle associated protein |
| TAIR curator summary | Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2. |
| Alias | [(AT)VAP][VAP][VAP27][VAP27-1][vesicle associated protein][VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.68115 |
Ahg471384 | Sec1/munc18-like (SM) proteins superfamily |
| 10.8167 |
Ahg334015 | PHF5-like protein |
| 18.3303 |
Ahg475701 | ADP-ribosylation factor A1E |
| 19.975 |
Ahg477582 | NAD(P)-binding Rossmann-fold superfamily protein |
| 22.9129 |
Ahg474065 | actin 8 |
| 27.6406 |
Ahg496503 | MA3 domain-containing protein |
| 30.8221 |
Ahg488817 | ARM repeat protein interacting with ABF2 |
| 34.0588 |
Ahg487868 | helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related |
| 39.1918 |
Ahg920595 | ubiquitin-conjugating enzyme 36 |
| 42.9884 |
Ahg477277 | RNA recognition motif (RRM)-containing protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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