Detail



ID : Ahg944195

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|944195|scaffold_700424.1
Sequence
AGTTTCTTAA GAAGTGAGAA GCAATGATTG GGTTATTTAA AGTTAAGGAA AAGCAAAGAG AGCAAGCTCA AAATGCTACT AGAGGAGGAG CTTCTGTCAA GAAGCAATCT GCTGGGGAAC TTCGTCTTCA CAAAGATATA TCAGAGTTGA ACCTTCCTAG CTCTTGTTCG ATATCTTTCC CAAATGGAAA AGATGATTTG ATGAACTTTG AAGTGTCCAT TAAACCCGAT GATGGATACT ACCACAATGG TACGTTTGTT TTCACATTCC AAGTTTCTCC TGTGTATCCA CATGAAGCTC CAAAAGTTAA ATGCAAAACC AAGGTTTATC ATCCCAATAT CGATTTGGAA GGAAACGTTT GCCTGAACAT CTTGCGTGAA GATTGGAAAC CGGTTCTTAA CATAAACACA GTTATCTACG GACTCTTCCA TCTGTTCACG GAACCCAATT CTGAAGATCC CTTGAACCAT GATGCTGCAG CAGTTTTAAG GGATAACCCA AAGCTGTTTG AGACCAATGT TCGCAGGGCC ATGACCGGGG GATATGTTGG TCAAACCTTT TTCCCGCGCT GTATCTAACA AAGCTCTGGT TTGTCTTC 
Length598
Protein Sequence
Protein Residue
Map Locationscaffold_7: 1564039.. 1565010
Download Sequence
A.thaliana
AGI-codeAT4G36800.1
DescriptionRUB1 conjugating enzyme 1
TAIR curator summaryRUB1 conjugating enzyme that conjugates CUL1 and is involved in auxin response and embryogenesis. RCE1 protein physically interacts with RBX1, which may be the E3 for CUL1.
Alias[RCE1][RUB1 conjugating enzyme 1]
Gene coexpression
MR
MR Locus Description
1 Ahg944194 RUB1 conjugating enzyme 1
2.82843 Ahg485125 transcription regulators;zinc ion binding
3.4641 Ahg470088 P-loop containing nucleoside triphosphate hydrolases superfamily protein
13.2665 Ahg908800 Protease-associated (PA) RING/U-box zinc finger family protein
13.8564 Ahg484645 ATPase, V0/A0 complex, subunit C/D
16.4317 Ahg484769 alfin-like 3
16.7332 Ahg486573 Calcium-dependent lipid-binding (CaLB domain) family protein
17.2916 Ahg328915 binding
21.4476 Ahg946855 FRIGIDA-like protein
22.0227 Ahg949897 Protein phosphatase 2C family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression